Marmota marmota marmota (Alpine marmot): 107137419
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Entry
107137419 CDS
T09644
Symbol
Trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107137419 (Trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107137419 (Trim54)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107137419 (Trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
Sina_RING
DUF349
CoiA_N
FlgN
COG2_C
DD_DDX21-DDX50
DUF1421
UvrD_C
DUF5799
Zn_ribbon_FGT1_2
SpoIISA_toxin
GH123_cat
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107137419
NCBI-ProteinID:
XP_015335349
Ensembl:
ENSMMMG00000020590
UniProt:
A0A8C6A2E8
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDSLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTAVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFETLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMEQFSVSVEHVAEMLRTIDFQPGATGEEEDEEVALDGDEGSAGPEEERLDGS
EGLH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgtgggcttcaagccgctgctcggggatgcgcacagcatggacagcctg
gagaagcagctcatctgccccatctgcctggagatgttctccaagcccgtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgcgccaatgatgtcttccaggcctcgaaccct
ctatggcaatccaggggctccactgctgtgtcttcaggaggccgtttccggtgcccatct
tgcaggcatgaggtggtcctggatcgacatggtgtgtatggcctgcagcgaaacctgcta
gtggagaacattatagacatttataagcaggagtcttcccggccactgcactccaaggct
gagcagcacctcatgtgtgaggaacacgaggaggagaagatcaatatctactgcttgagc
tgtgaagtgcctacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gctccactgcccaccatttacaaacgccagaagagtgagctcagcgatggcattgcaatg
ctggtggcaggaaatgaccgtgtgcaagcagtgatcacacagatggaggaggtgtgccag
accattgaggacaacagccgcaggcagaagcagttgctaaaccagaggttcgagaccctg
tgcgcggtgctggaagagcgtaagggcgagctcctgcaagcgctggctcgggagcaggaa
gagaagctgcagcgcgtccgcggcctcatccgtcagtatggagatcacctggaggcttcc
tctaaactggtggagtcagccatccagtccatggaggagccgcagatggcactatacctg
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctagcggga
cggccggagccaggctacgaaagcatggagcaattttccgtgagcgtggagcatgtggcc
gaaatgctgaggaccatcgacttccagccgggcgccactggggaagaagaggatgaggag
gtggcgctggacggggacgagggcagtgcaggaccagaggaagagcgactggacgggtca
gaagggctgcactga
DBGET
integrated database retrieval system
