KEGG   Marmota marmota marmota (Alpine marmot): 107137435
Entry
107137435         CDS       T09644                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor RAE1
  KO
K14298  mRNA export factor
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013  Nucleocytoplasmic transport
mmma05014  Amyotrophic lateral sclerosis
mmma05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107137435 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    107137435 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    107137435 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107137435 (Rae1)
   03036 Chromosome and associated proteins [BR:mmma03036]
    107137435 (Rae1)
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107137435 (Rae1)
Chromosome and associated proteins [BR:mmma03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    107137435 (Rae1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 107137435
NCBI-ProteinID: XP_015335379
Ensembl: ENSMMMG00000008713
UniProt: A0A8C5Z783
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSTPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctattcggaacaacctcaggttttggaactggcgggaccagcatgtttggcagc
acaaccacagataatcacaaccctatgaaggatattgaagtaacatcttctcctgatgat
agcatcggctgtctgtcttttagcccaccaaccttaccggggaactttcttattgcagga
tcgtgggctaatgatgttcgctgctgggaagttcaggacagtgggcagaccattccaaaa
gcccagcagatgcacactggacccgtgttggacgtctgctggagtgatgatgggagcaaa
gtatttacagcatcatgtgataaaactgccaaaatgtgggacctcaatagtaaccaggca
atacagattgcacagcatgatgcacctgttaagaccatacattggatcaaagctccaaac
tatagctgcgtgatgactgggagctgggataagactctgaagttttgggatacccggtca
tcaactcccatgatggtcttgcagctccctgagaggtgttactgtgccgatgtgatctac
ccaatggccgtggtggcgactgcagagaggggcctgatcgtgtatcagttagagaaccag
ccctctgaattcaggaggatagaatctccactaaagcaccagcatcgttgtgtggctatt
tttaaagacaaacagaacaagccgactggctttgccctggggagcatcgaggggagagtt
gctattcactacatcaaccccccaaatcctgccaaagataacttcacctttaaatgtcat
cgatccaatggaaccaatacttcagctccacaggacatctatgcggtaaatggaattgca
ttccatcctgttcatggcaccctggcaaccgtgggatctgatgggaggttcagcttctgg
gacaaagacgccagaacaaagctgaagacttccgagcagttagatcagccgatatccgcc
tgctgcttcaaccacaatgggaacatatttgcttacgcttccagctatgattggtccaag
ggacacgagttttataatccccaaaagaaaaattacattttcctgcgtaatgcagctgaa
gagctaaagcccaggaataagaagtag

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