Marmota marmota marmota (Alpine marmot): 107137485
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Entry
107137485 CDS
T09644
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107137485 (Ddx1)
03016 Transfer RNA biogenesis [BR:
mmma03016
]
107137485 (Ddx1)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107137485 (Ddx1)
Spliceosome [BR:
mmma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107137485 (Ddx1)
Transfer RNA biogenesis [BR:
mmma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107137485 (Ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
SNF2-rel_dom
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
107137485
NCBI-ProteinID:
XP_015335444
Ensembl:
ENSMMMG00000022392
UniProt:
A0A8C6A8E3
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK
GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEF
TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEVPPHMKNQALFPACVLKNAELKFNFGEEE
FKFPPKDGFVALSKAPDSYVVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLSQGYSDFINRMHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGANSPEMWS
EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQFSCVCLH
GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL
NCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagattgcacaagctgtggaagagatggattggctcctcccaact
gatatccaagctgaatccatcccattgatcctaggaggaggtgatgtacttatggctgca
gaaacaggaagtggaaaaactggtgctttcagtattccagttatacagatagtttatgaa
actctgaaagaccaacaagaagggaaaaaaggaaaaacaacaattaaaactggtgcttcg
gtgctcaacaaatggcaaatgaatccatatgacagaggatctgcttttgcaattgggtca
gatggtctttgttgtcaaagtagagaagtgaaggaatggcacggatgcagagctactaaa
ggattaatgaaagggaaacattactatgaagtctcctgtcatgaccagggattgtgcaga
gttgggtggtctaccatgcaggcctccctagatctaggtacagacaagtttggatttggc
tttggtggaacaggaaagaaatcccataacaaacagtttgataattatggagaggaattc
actatgcatgacaccattggatgttacctagatatagataaaggacatgtcaaattctcc
aaaaatgggaaagatcttggtctggcatttgaagtaccaccacatatgaaaaaccaagcc
ctctttcctgcttgtgttttgaagaatgctgaactaaaatttaactttggtgaagaagaa
tttaagtttccaccaaaagatggttttgttgctctttccaaggcaccggatagttacgtt
gtcaaatcacagcacacaggtaatgcgcaggtgacacaaacaaagtttctccccaatgct
ccaaaagctctcatcgttgaaccctctcgtgaattagctgaacaaactttgaataatgtc
aagcagtttaagaaatatgttgataatcctaaattaagggagcttctgataattggaggt
gttgcagcacgggatcagctctctgttttggataatggggttgatattgttgtaggcacc
ccaggaagactagatgatttggtgtcaactggaaagctgaacttatctcaagttagattc
ctggtcctggatgaagctgatggacttctttctcaaggttattctgattttataaataga
atgcacagtcagattcctcagattacctcagatggaaaaagacttcaggtgattgtttgc
tctgctactttgcattcttttgatgtaaagaaactctctgagaaaataatgcattttccc
acatgggttgatttaaaaggagaagattctgttccagatactgtacaccatgttgttgtc
ccagtgaatcccaaaactgacagactctgggaaaggctaggaaaaaaccacattagaact
gatgatgtacatgcaaaagataatacaagacctggtgctaacagtccagagatgtggtct
gaagctattaaaatcctgaagggggagtatgctgtccgagcaatcaaggaacacaagatg
gatcaagcaattatcttctgtagaaccaaaattgactgtgataatttggagcagtatttt
atgcagcagggaggaggacctgataaaaaaggacaccagttctcatgtgtttgtcttcat
ggtgatagaaagcctcatgagagaaagcaaaaccttgaacgatttaagaaaggagacgtg
agattcttgatttgcacagatgtagctgctagaggaattgatatccatggtgttccttat
gttataaatgtcaccctgcctgatgaaaagcaaaactatgtacaccgaattggcagagta
ggcagagctgaaaggatgggtctggccatttccctggtggcaacagaaaaagaaaaggtt
tggtaccatgtatgtagcaatcgtggaaaagggtgttacaatacgagactcaaagaagat
ggtggatgtaccatttggtacaatgagatgcagcttctctctgagatagaagaacacctg
aactgcaccatttctcaggttgagccggatatcaaggttccagtggatgaatttgatgga
aaagttacttatggtcaaaagagggctgctggtggtggaaactataaaggccatgtggat
attttggcacctaccgttcaagagttggctgcccttgaaaaggaggcacagacatctttc
ctgcatcttggctatcttcctaaccagctgttcagaaccttctga
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