Marmota marmota marmota (Alpine marmot): 107137520
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Entry
107137520 CDS
T09644
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107137520 (Ctcfl)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107137520 (Ctcfl)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107137520 (Ctcfl)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107137520 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_15
Zn_ribbon_8
zf-C2H2_6
zf-C2H2_ZN142
DUF7479
zf-C2H2_7th_ZNF462
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
107137520
NCBI-ProteinID:
XP_048666827
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MAATEVSGPSTQFTKIKEPDVLPAQVPEQGTQEETVRRSGSPQGASELQAEGSCRPLQAK
HLEGELSLVPAPSEKHILTLQTVHLASEDVEMRELGWLSAQPAEEVQVVVQADSGLPSLL
WLREEPQQSAQQCLAISVQEELFPLQGVEVMQFHLLEENVSATGEERQLAASGAQSTGLT
KLEKGEEEEQLVVENRSTEGTEEQFFLVEARPGVEGKDEIVLTISNLNVEEQQDKPASGQ
ADVEKASSIKNQRKTKAAKRTFRTFRCSVCMFTSSRVSSFNRHMKTHTSEKPHMCHLCLK
AFRTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYRHTHEKPFSCSLCKYASV
EASKLKRHIRSHTGERPFQCRLCSYASKDSYKLKRHMRTHSGEKPYECHVCHARFTQSGT
MKIHVLQKHSENVPKYQCPHCATIIARKSDLRVHLRNLHTYKATEMRCRYCSAGFHERYA
LIQHQKTHRNEKRFKCQHCSYACKQERHMTAHVRTHTGEKPFECLSCDKRFRQKQLLNVH
FRKYHDSDFIPTVHKCPKCGKGFSRWSNMHRHAEKCDSGQERTATSGKGRRVRKRRPTVP
KEAGKDDEAAAAEVSVASGAPLPSQVAPVPREETAAGGRALGEDMTCEIILNMMVE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccgaggtctcgggcccttccacgcagtttaccaaaatcaaagagcctgat
gtgctgccggcccaagtcccagagcagggtacgcaggaagaaacagtgcgcagatctggg
agcccgcagggcgccagcgagctgcaggccgaggggagctgcaggcccctgcaagccaag
cacctggagggagagctgtcgctggtgcccgccccgagcgagaagcacatcctgacactg
cagaccgtgcacttggcttctgaagacgtggagatgcgggagctgggctggctgagtgca
cagccggcagaggaggtgcaggtggtggtgcaggccgacagcgggctgccgtcgctgctg
tggctccgcgaagagccccaacagagtgcgcagcagtgcctggccatcagcgtccaggaa
gagctgttcccgctgcaaggggtagaggtgatgcagttccacctgctggaggagaacgtg
tccgcaacgggcgaagagcgccagttagcggccagcggggcccaaagcacaggattgacc
aagcttgaaaaaggtgaggaagaggagcagctggtggtggaaaaccgatcaactgaaggc
acagaagagcaattctttcttgtggaagcaaggccaggagtcgaaggaaaagatgaaatt
gttctgacaatttccaatttaaacgtggaagaacagcaagataaacctgcatctggtcaa
gcagatgtcgaaaaagccagctctataaaaaatcaaagaaaaacaaaggcagccaagcgg
accttccggaccttccgctgcagcgtctgcatgttcacctcctctagagtctcgagtttc
aatcgtcacatgaaaacccacaccagcgagaagcctcacatgtgccacctttgcttgaag
gccttccgcaccgtcactctgctgcggaaccacgtcaacacccacacaggaaccaggccc
tacaagtgtggggactgcgacatggcctttgtgaccagcggggagctcgtccggcacagg
cgctacagacacacccacgagaagcccttcagctgctccttgtgcaaatacgcaagtgtg
gaggccagcaagctgaagcgccacatccgctcgcacacgggggagcgccccttccagtgc
cgcctgtgcagctacgccagcaaggactcctataagctgaagcgccacatgcgcacacac
tcgggtgagaagccctatgagtgccacgtctgtcacgcccggttcacccagagcgggacc
atgaagatccacgtgctgcagaagcacagcgagaacgtgcccaagtaccagtgtccccac
tgtgccaccatcatcgcgcggaagagcgacctgcgtgtgcacttgcgcaacctgcacacc
tacaaggccacagagatgaggtgccgctactgctccgccgggttccacgagcgctatgcc
ctcattcagcaccagaagacccacaggaacgagaagaggttcaagtgccagcactgcagc
tacgcctgcaaacaggagcgccacatgaccgcccacgtccgcacccacacgggggagaag
cccttcgagtgcctttcctgcgacaagcgcttccggcagaagcagcttctcaacgtccac
ttccggaagtaccacgactcggatttcatccccacggtgcacaagtgccccaagtgcggc
aagggcttctcccgctggagcaacatgcacagacacgcagagaagtgtgactcgggccag
gagaggacggccacctcggggaaaggaagacgggtgaggaagaggcggccgacagtcccc
aaggaagcaggaaaggatgacgaggctgctgcagcagaggtctccgttgccagcggggcc
ccgctccccagccaggtggctcctgtcccccgtgaagaaacagcagccggtggcagggcc
ctgggtgaagacatgacctgcgagatcatcctcaacatgatggtcgagtga
DBGET
integrated database retrieval system
