KEGG   Marmota marmota marmota (Alpine marmot): 107138053
Entry
107138053         CDS       T09644                                 
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha
  KO
K08532  RAR-related orphan receptor alpha
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04659  Th17 cell differentiation
mmma04710  Circadian rhythm
mmma05017  Spinocerebellar ataxia
mmma05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    107138053 (Rora)
  09159 Environmental adaptation
   04710 Circadian rhythm
    107138053 (Rora)
 09160 Human Diseases
  09163 Immune disease
   05321 Inflammatory bowel disease
    107138053 (Rora)
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    107138053 (Rora)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmma03000]
    107138053 (Rora)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmma03310]
    107138053 (Rora)
Transcription factors [BR:mmma03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    107138053 (Rora)
Nuclear receptors [BR:mmma03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   107138053 (Rora)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 107138053
NCBI-ProteinID: XP_015336080
Ensembl: ENSMMMG00000011194
LinkDB
Position
Unknown
AA seq 459 aa
MAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTP
TYNISANGLTELHEDLSTYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFL
QEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFS
AFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRH
TEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggctcaaattgaaattattccatgcaagatctgtggagacaaatcatcaggaatccat
tatggtgtcattacgtgtgaaggctgcaagggctttttcaggagaagtcagcaaagcaat
gccacctactcctgtcctcgtcagaagaactgtttgattgatcgaaccagtagaaaccgc
tgccaacactgtcgattgcagaaatgccttgccgtagggatgtctcgagacgctgtaaaa
tttggtcgaatgtcgaaaaagcagagagacagcttatatgcagaagtgcagaaacaccgg
atgcagcagcagcagcgcgaccaccagcagcagcctggagaggctgagccgctgacaccc
acctacaacatctcggccaacgggctgacagagcttcacgaggacctcagtacctacatc
gatgggcacacccccgagggcagcaaggccgactctgctgtcagcagcttctacctggac
atacagccctccccagaccagtcagggcttgatatcaatggaatcaaaccagaacccata
tgtgactacacaccagcatctggcttttttccctactgttcgttcaccaatggagagact
tccccaacggtgtccatggcagaactagaacaccttgcacagaatatatctaaatcacat
ctggaaacctgccaatacttgagagaagagctccagcagataacgtggcagacctttctg
caggaagagattgagaactatcaaaacaagcagcgggaggtgatgtggcaattgtgtgcc
atcaaaatcacagaagctatacagtatgtggtggagtttgccaaacgcattgatggattt
atggagctgtgtcaaaacgatcaaattgtgcttctaaaagcaggttctctagaagtggtg
ttcatcaggatgtgccgtgcctttgactctcagaacaacaccgtgtactttgatgggaag
tatgccagccccgatgtcttcaaatccttaggctgtgaagactttattagctttgtgttt
gaatttggaaagagtttatgttctatgcacctgactgaagatgaaattgcattattttct
gcgtttgtactgatgtcagcagatcgctcatggctacaggaaaaggtaaaaattgaaaaa
ctgcaacagaaaattcagctagctcttcaacacgttctacagaagaatcaccgagaagat
ggaatactaacaaagttaatatgcaaggtgtctacattaagagccttatgtggacgacat
acggaaaagctaatggcatttaaagcaatatacccagacattgtgcgacttcattttcct
ccattatacaaggagttgttcacttcagaatttgagccagcaatgcaaattgatgggtaa

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