Marmota marmota marmota (Alpine marmot): 107138053
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Entry
107138053 CDS
T09644
Symbol
Rora
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04659
Th17 cell differentiation
mmma04710
Circadian rhythm
mmma05017
Spinocerebellar ataxia
mmma05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
107138053 (Rora)
09159 Environmental adaptation
04710 Circadian rhythm
107138053 (Rora)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
107138053 (Rora)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
107138053 (Rora)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107138053 (Rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmma03310
]
107138053 (Rora)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107138053 (Rora)
Nuclear receptors [BR:
mmma03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
107138053 (Rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107138053
NCBI-ProteinID:
XP_015336080
Ensembl:
ENSMMMG00000011194
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTP
TYNISANGLTELHEDLSTYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFL
QEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFS
AFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRH
TEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattgaaattattccatgcaagatctgtggagacaaatcatcaggaatccat
tatggtgtcattacgtgtgaaggctgcaagggctttttcaggagaagtcagcaaagcaat
gccacctactcctgtcctcgtcagaagaactgtttgattgatcgaaccagtagaaaccgc
tgccaacactgtcgattgcagaaatgccttgccgtagggatgtctcgagacgctgtaaaa
tttggtcgaatgtcgaaaaagcagagagacagcttatatgcagaagtgcagaaacaccgg
atgcagcagcagcagcgcgaccaccagcagcagcctggagaggctgagccgctgacaccc
acctacaacatctcggccaacgggctgacagagcttcacgaggacctcagtacctacatc
gatgggcacacccccgagggcagcaaggccgactctgctgtcagcagcttctacctggac
atacagccctccccagaccagtcagggcttgatatcaatggaatcaaaccagaacccata
tgtgactacacaccagcatctggcttttttccctactgttcgttcaccaatggagagact
tccccaacggtgtccatggcagaactagaacaccttgcacagaatatatctaaatcacat
ctggaaacctgccaatacttgagagaagagctccagcagataacgtggcagacctttctg
caggaagagattgagaactatcaaaacaagcagcgggaggtgatgtggcaattgtgtgcc
atcaaaatcacagaagctatacagtatgtggtggagtttgccaaacgcattgatggattt
atggagctgtgtcaaaacgatcaaattgtgcttctaaaagcaggttctctagaagtggtg
ttcatcaggatgtgccgtgcctttgactctcagaacaacaccgtgtactttgatgggaag
tatgccagccccgatgtcttcaaatccttaggctgtgaagactttattagctttgtgttt
gaatttggaaagagtttatgttctatgcacctgactgaagatgaaattgcattattttct
gcgtttgtactgatgtcagcagatcgctcatggctacaggaaaaggtaaaaattgaaaaa
ctgcaacagaaaattcagctagctcttcaacacgttctacagaagaatcaccgagaagat
ggaatactaacaaagttaatatgcaaggtgtctacattaagagccttatgtggacgacat
acggaaaagctaatggcatttaaagcaatatacccagacattgtgcgacttcattttcct
ccattatacaaggagttgttcacttcagaatttgagccagcaatgcaaattgatgggtaa
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