Marmota marmota marmota (Alpine marmot): 107138090
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Entry
107138090 CDS
T09644
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107138090 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107138090 (Myo5c)
04131 Membrane trafficking [BR:
mmma04131
]
107138090 (Myo5c)
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107138090 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mmma04812
]
107138090 (Myo5c)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107138090 (Myo5c)
mRNA cycle factors
P-body specific factors
107138090 (Myo5c)
Membrane trafficking [BR:
mmma04131
]
Others
Actin-binding proteins
Myosins
107138090 (Myo5c)
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107138090 (Myo5c)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107138090 (Myo5c)
BRITE hierarchy
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
107138090
NCBI-ProteinID:
XP_015336132
Ensembl:
ENSMMMG00000015665
UniProt:
A0A8C5ZPA3
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLQLLLEDGTELDYPIDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQLEFKHLKLGSAEEFNYTRMGGSTVIEGVNDR
ADMVETQNTFKLLGFKEDFQMDVFKILAAILHLGNVQIAAVGNERSFISEDDSHLKVFCE
LLGLENSKVAQWLCSRKIVTTSETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSSASFIIQHFADKVEYKCEGFLEKNRDTVYDMLVETLRASKFHLCAKFFQENPIPSSPF
GSMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTPQELAVSDKKQVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAITALALKEAWAAIIIQKHCRGYLVRNLYQLIRVATITIQAY
SRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAGDIEKIQKLETELERAATHRQNYEEKGKRYKDTVEEKLAK
LQKHNSELEIQKQQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEERQRILLEKSFELKTQ
DYEKQIQSLKEEIKALKDEKTQLHHRLEEERVTSDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITKQLLESYDVEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VARLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTEKMKGKLEELSNQLNRRLEEEGTQ
RKAAEAQNEIHTKAKEKLMDKIQELQEASEHLKKQCETESEVGSDFRQEASRLSLENRDL
EEELDMKDRVIKKLQDQVKTLTKTIEKASDVHLPSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKDHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIIMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYT
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTASPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacactcagtacaacagggtttggattcctgatcctgaagaa
gtttggaagtctgctgaaatagcaaaggactacagagttggtgacaaagtcctgcaactc
ctgctagaagatggaacggagctggattatcccattgacccagaatcactgcctcctctc
aggaatcctgacatccttgtgggcgagaatgacctcaccgccctcagctatctccacgag
cctgcagtgctccacaatctcagaatccgctttgcagagtccaaactcatttacacctac
agcggaatcattttggtggccatgaatccctacaagcagctgcccatatatggggatgcc
atcatccatgcctacagcgggcagaacatgggcgacatggacccacacatatttgccgtg
gcagaagaggcctacaagcagatggccagaaacaatagaaatcagtcaataattgtgagt
ggggagtcgggagctggaaagacggtgtctgctcgctatgccatgaggtacttcgccacc
gtcagcaagtccagcagcaacgctcacgtggaggacaaggtcctggcgtccaatcccatc
accgaggctgttggaaatgccaagaccacacgcaatgacaacagcagtcgtttcgggaag
tacacagaaatcagctttgatgagagaaatcagattataggagccaacatgagaacctac
ctcttggagaaatccagagttgtctttcaatcagaaaatgaacggaattaccacattttc
tatcagctttgcgcgtctgcacaacagttggaatttaaacatcttaaactggggagtgca
gaagaatttaattatacaagaatgggaggcagtactgtcatcgagggtgtgaatgaccga
gctgacatggtagagactcagaacaccttcaagctactgggtttcaaggaggattttcag
atggatgtttttaagatcctggcagccatcctgcacctgggcaacgtgcagattgcagca
gtgggcaacgagagatccttcattagtgaggatgacagtcacctgaaggtgttctgcgag
ctcctgggtctggagaatagcaaagtcgctcagtggctatgcagccgtaaaattgtcaca
acctctgagacagtggtgaaacccatgaccaggccccaggccatcaacgccagggatgcg
ctggccaaaaagatctatgctcacctgtttgacttcattgtggagagaattaaccaagca
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacaattctgcatcaattatgctaatgaaaagctgcaa
caacagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagacatc
ccttggactctgatagatttttatgacaaccagccagttattgacctaattgaagcaaag
atgggcattttggaattactggatgaagaatgtttgttaccacatggaactgatgaaaat
tggcttcaaaagctgtataataattttgtcaacaagaactccttatttgaaaaacccaga
atgtcaagcgcatcctttatcattcagcactttgccgataaggtagagtataaatgtgaa
ggtttcctcgagaagaacagagacactgtctatgacatgctggttgaaaccctgagagca
agcaagtttcatctctgtgccaaattttttcaagaaaatcccattccttcttcccctttt
ggctcaatgatcacagttaaatctgctaagcaagtcatcaagccgaacagcaagcacttc
cggaccacagttgggagcaagttccgcagctctctgtacttgctcatggagaccctcaat
gccacaacacctcattatgttcgatgcatcaagccaaatgatgagaaattgccctttgag
tttgactccaaaagaatcgtccagcagctgcgagcctgtggtgttttggagacaattcgc
atcagtgcgcagagctatccttccaggtggacgtacatcgagttctacagtcgctatggt
gtcctcatgaccccgcaggagctcgccgtcagtgataagaagcaggtgtgcaaggtggtt
ttgcacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcgggtcaagtggcttacttagagaaactccgattggataaactgaggcagggttgt
attgtgatacaaaagcatgtccgtggctggcttcagaggaaaaaattcctccgagagagg
caagctgccctgaccatccagcagtacttccggggccagcaaaccgtgaggaaagctatc
accgccttggccttgaaagaagcctgggcggccatcatcattcagaagcactgccgtggg
tacctggtccgcaatctataccagctgatccgcgtggccaccatcaccatccaggcctac
tcccgaggattcctggccaggaggaggtatcgaaagatgctggaggaacacaaggccgtg
atccttcagaaatatgcccgggcatggctggccaggcgcagattccagaatatccgacga
tttgtgctcaacattcagctgacttacagggtccagcgtttgcagaaaaagctagaggat
cagaacaaagagaaccacgggctggtggagaagctgaccagcctggctgctctccgggcc
ggtgacatagagaagattcagaagctggaaacggagctggaaagagcggccacccacagg
cagaattacgaggagaagggcaagagatacaaggatacagtggaagagaaattggcaaag
cttcagaagcataattcagaactggaaatacagaaacagcaaatacagttgaagcttcaa
gagaagactgaagagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtacaaaaagaagaacgacaaagaatacttcttgaaaaaagttttgagttgaaaacacaa
gactatgagaagcagattcaatctctgaaagaagaaattaaagctctcaaggatgagaaa
acacaactccaccatcggctggaggaggagcgcgtcacctcagatggcctcaagggggaa
gtggctcggctgagcaagcaggctaagaccatctctgagtttgagaaggagatcgagctg
cttcagacccagaagatagacgtggaaaaacacgtgcagtcacagaaacgagaaatgaga
gaaaagatgtcagagatcaccaaacaacttctcgagagctatgacgttgaagacgtaaga
agcaggctttctgtggaagatttggagcatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacgtgttttggagaaccatttccagtctcagaaagat
tgctatgaaaaggaaattgaagctctgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaaattgtttagagaagagaatgatatcaatgaaagtatccgtcatgaa
gttgccaggctgacatcagaaaacatgatgattccagactttaaacagcaaatttcagag
ctggagaaacagaagcaagatcttgaaattcgtctgaatgaacaaactgagaaaatgaaa
ggaaaactagaagaattgtctaatcagttaaatcgccgtctagaagaggaaggaacacaa
agaaaggcagcagaagcgcagaatgaaatacacaccaaagcgaaagagaagctgatggat
aagatccaagagctgcaggaggccagcgagcacctgaagaagcaatgtgagaccgaaagt
gaagttgggagtgattttcggcaggaagcttctcgtctctctttggaaaacagggacctt
gaagaagagttagacatgaaggacagagtgattaaaaagctacaagatcaagtcaagact
ctaaccaagacgattgaaaaagccagtgatgtacacttgccctcgggacccaaggagtac
cttggaatgctggaatacaagagagaagacgaggccaagctcattcaaaacctcattctt
gatctgaagccccgtggtgtggttgtgaacatgatccccggactgccggctcacatcctg
ttcatgtgtgtacgctatgcagactctttaaatgatgccaacatgctgaagtccctcatg
aacagcaccattaatggcatcaagcaggtggttaaggaccatttagaagactttgagatg
ctgtccttttggctttccaatacgtgtcacttcctcaactgcctgaagcagtacagtgga
gaagaggaatttatgaagcataacagtccacatcagaataagaattgcttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggccatacgaatatatcatcagttc
attatcataatggaaaataacatccaaccaataatagtgcccggcatgctggagtatgag
agtctgcagggcatctccggcctgaagcccacgggcttccggaagcggtcatccagcatt
gatgacacggacgcctacacgatgacctccatcctgcagcagctgagctatttctacacc
accatgtgccagaatggcctggacccggagctcgtgaggcaggcagtgaagcaactgttc
ttcttgattggggcagtcaccctgaatagcctcttcctgcgcaaggacatgtgctcctgc
aggaaagggatgcagataaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttagccaaggaaactttggagcccctctctcaggcagcctggttg
ctccaggtcaagaagaccacagacagcgatgccaaggagatctacgaacgctgcacctca
ttgtcagctgtgcagatcataaagatccttaattcatacacacctatagatgacttcgag
aaaagagtgactccatcctttgttcgaaaagtacaggcacttctgaatagccgggaggat
tcatcacagctgatgttagataccaaatacctctttcaagtcacatttccttttactgcc
tctccacatgctctggaaatgattcagatccccagcagtttcaagctaggctttctcaat
agattatag
DBGET
integrated database retrieval system
