Marmota marmota marmota (Alpine marmot): 107138412
Help
Entry
107138412 CDS
T09644
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04820
Cytoskeleton in muscle cells
mmma04926
Relaxin signaling pathway
mmma04933
AGE-RAGE signaling pathway in diabetic complications
mmma04974
Protein digestion and absorption
mmma05146
Amoebiasis
mmma05165
Human papillomavirus infection
mmma05200
Pathways in cancer
mmma05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107138412 (Col4a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107138412 (Col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107138412 (Col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107138412 (Col4a3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107138412 (Col4a3)
09154 Digestive system
04974 Protein digestion and absorption
107138412 (Col4a3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107138412 (Col4a3)
09162 Cancer: specific types
05222 Small cell lung cancer
107138412 (Col4a3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107138412 (Col4a3)
09174 Infectious disease: parasitic
05146 Amoebiasis
107138412 (Col4a3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107138412 (Col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107138412 (Col4a3)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107138412 (Col4a3)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107138412 (Col4a3)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107138412 (Col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107138412
NCBI-ProteinID:
XP_048664590
Ensembl:
ENSMMMG00000000287
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MRPGSLRRPTALLLRLLLVLLAAAPAASKGCVCKDKGQCFCDPAKGEKGEKGFPGPPGSP
GQKGFPGPEGLPGPQGPKGCPGRPGLTGPKGVRGITGLPGFSGPPGLPGLPGHPGPFGPT
GLPGCNGSKGERGFPGFPGTPGYPGVPGAAGPKGQKGAPAKGEDRKLNGRGDPGLPGPPG
SQGLPGPPGFPGPMGPPGPPGFLGFPGATGPVGPKGHMGDNVIGQKGEKGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDKGAMGESGPPGPPGPPGESYGSAKGAPGEPGPQGKPG
KGGTPGFPGTEGAKGNRGFPGLMGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGIPG
PPGPKGAHGPQGPSGPPGVPGSPGSSSPGLRGAPGWPGLKGIKGERGPPGKNTVGLPGSP
GCPGSPGPAGPPGPPGPPGDTIFRKGPPGNRGLPGHLGPSGVPGVYGPKGEPGLLCIECP
FIPGPPGLPGLPGLDGVKGIPGGRGATGVKGSPGSPGSAGLPGFPGFPGAEGDPGLKGGK
GETFPPQGPVGAPGDPGLRGHPGKKGLDGIPGTPGAKGLPGPRGEPALSGEKGDQGPPGD
PGSPGSPGSAGPAGPPGYGPPGEPGPKGTQGIPGAPGPPGEAGPKGESTVSTPVPGLPGP
PGRPGHAGPPGPPGIPGSMGKCNPGLPGPDGEPGIPGTGFPGPPGPKGDPGFPGTKGSPG
CPGKMGEPGLPGQSGFPGAKGEPALARPGEPGKPGFPGERGNSGENGEIGLPGLPGLPGI
PGKEGLDGPRGDPGHPGPPGDKGPPGRCLEGPRGAQGLPGLNGLQGQPGRRGVTGPKGDP
GIPGLDRSGFPGEPGPPGKPGHRGEMGPPGHKGYPGTPGFSGPPGGRGMVGLMGHPGATG
PPGPPGNPGMQGQKGSLGIPGIKGERGPPGTRGEQGDKGNPGPSQIVHLKGDKGEPGPKG
FAGYPGEKGNRGIPGFPGLKGHEGPPGPPGPPGPRGDPGSPGNPGDPGPRGAPGSMGNMG
VPGSKGKRGTLGLPGLAGRPGFPGTHGQQGDKGEPGYSKDTRPGPPGPKGDPGLPGDVGK
KGERGAPGPPGRSGPAGPEGAPGSPGDPGHPGKPGPDGDLGLKGIKGFPGRPGTKGPPGL
PGFPGPPGPMGVRGNQGHDGIPGPAGEKGETGLLGAHPGPRGNPGAPGAKGDRGAPGWPG
LPGRKGTMGDFGPRGPMGITGPPGPPGRPGTIIPGQKGNRGPPGSRGYPGDPGPPGPPGS
HVKCIKGDKGFMGQPGPKGLPGSIGDIGPPGHPGAPGTPGLPGLRGDPGFRGFPGIKGEK
GDPGFQGSIGPPGPIGPKGPPGVRGDPGTLKIISLPGSPGPPGPPGPPGMQGEPGPVGSP
GNPGPCGPRGKPGKDGKPGIPGPAGEKGHKGHKGEQGPPGSDGLPGLKGKPGDIGLLATE
TRRRGFVFTRHSQATVIPACPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNVDEVCNFASRNDYSYWLSTPALMPMDMAPITGRALETFISRCTVCEGPAMTIAV
HSQTTTIPPCPHGWVSLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGELEKIISRCQVCMKKGH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgggtccttacggaggccgacggcactcctgcttcgactcctgctggtgctc
ctggctgccgcgcccgcggcgagcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgcgacccagccaagggggagaagggggagaaaggctttcctggaccccctggttctcct
ggccagaaaggattcccaggtcctgaaggcttgcctggaccacagggacccaagggttgt
ccaggacgtccaggactcactggtcccaaaggtgtaaggggaataactggattaccagga
ttttcaggccctcctggacttccaggcctcccgggccatcctgggccttttggacctact
ggtttaccaggatgcaatggctctaagggggaacgaggatttccaggatttccagggaca
ccaggctacccaggggtcccgggtgctgctggccccaaaggacaaaagggtgctcctgct
aaaggagaagacagaaaactcaatggaagaggtgaccccgggctgccaggacctccagga
tcccagggtttgccaggccccccaggttttccaggacctatgggcccacctggccctcca
ggattccttggctttccaggagctacaggacctgtagggcctaagggtcacatgggtgat
aacgtgataggacaaaaaggagaaaagggtgtgaaaggattaacaggcccccctggccca
ccaggaacagttattgtgacactaactggtccagacaacagaacggacctcaagggggag
aagggagacaagggagccatgggagaatctggacctcctggacccccaggaccacctgga
gaatcatatggatctgcaaaaggtgctcctggagaacctggcccacagggaaaacctgga
aaaggtggtacccctggcttccctggcactgagggagccaaaggcaacaggggcttccct
gggttaatgggtgaagatggcattaagggatggaaaggggacatcggccccccaggattt
cgcggtccaacagaatattatgatgcataccaggaaaagggagatgaaggaatcccaggc
cctccaggacccaaaggagcacatggcccacagggtcccagtggtccccctggagttcct
ggaagtcctggatcatcaagtcctggcctcagaggagcccccgggtggcctggcttgaaa
ggaatcaaaggggagcgaggacctccaggaaagaacactgtgggcctgcctgggtcccct
ggctgtcctggttcaccaggccctgcagggccaccaggacctccaggacctccaggtgat
accatttttcgcaagggtccacctggcaatcgtggcctgccaggccatctagggccttcg
ggagtcccaggagtctatgggcccaaaggagaaccaggcctcctgtgcatagagtgcccc
tttattccagggccccctggcctcccaggattgccagggttggatggtgtcaaaggaatc
ccaggaggtcgaggtgctactggagtgaaaggaagccccgggtccccaggaagtgctggt
cttccaggatttccaggattcccaggtgctgagggagatcctggacttaaaggaggaaaa
ggcgaaacatttccaccccaggggccagtgggtgccccaggggatcccgggctcagaggg
catccagggaaaaagggcttggatggaattcctggaactccgggagctaaaggattacca
ggacctagaggagaaccggccttgagtggtgagaagggggaccagggtcctccaggggat
cctgggtcccctgggtccccaggatctgcaggacctgctggaccacctggctatggaccc
ccgggagagccaggtccaaagggcacccaaggaattcctggagccccaggaccacctgga
gaagccggtcctaagggagaatccactgtttcaacaccagtcccaggcctcccaggaccc
ccagggcgccctggccatgctggtcccccaggtccacctggtatcccaggatccatgggg
aaatgtaatcctggtcttcctggacctgatggtgaaccaggaattccaggaactggattt
cctggacctcccggacctaagggagatccaggttttccaggaacaaaaggatcaccaggt
tgtcctgggaaaatgggagagcccgggttacctggacagtcaggcttcccaggagccaag
ggagaaccagcactagccaggcctggagaaccaggaaaaccaggttttccgggagaaaga
ggcaattctggggaaaatggagaaattggactccctggacttccaggtctccctggaatt
ccaggaaaagaagggcttgatggaccacgaggagatccagggcatcctgggccacctgga
gataaaggacctccaggaaggtgcctagagggccccagaggagcccaaggacttccaggc
ttaaatggattgcaagggcaaccaggcagaagaggtgtgacagggccaaaaggggaccca
ggaattccaggcttggataggtcaggattccctggagaacctggaccaccaggaaagcca
ggtcatcgaggtgagatgggaccacctggtcacaaaggatatccaggaactccaggattt
tcaggaccaccaggtggaaggggcatggttgggttgatgggccatcctggagccactggc
cctcctgggcctcctgggaacccaggcatgcaggggcagaagggtagccttggaattcca
ggaataaagggtgagagaggacccccaggaaccagaggggaacaaggagataaaggaaat
ccaggtccttctcaaatagtccatttaaagggagacaaaggagaacccgggcccaaaggg
tttgcaggatatccaggtgagaaaggaaacagaggtattccagggtttccaggtttaaaa
ggccatgaaggaccacctggaccaccaggaccaccaggccctcggggagatccaggaagc
cctgggaatcctggagacccaggaccacgtggtgccccaggaagcatggggaacatgggt
gtgccaggttctaaaggaaaaagaggaactttaggacttccaggtctagctggaagacca
ggcttcccaggtactcatggtcaacaaggagataagggagaaccaggttactcaaaagac
acaaggccaggaccaccaggaccaaagggggatccaggattgccaggtgacgtgggaaag
aaaggagaaagaggggcccctggcccacctggacgatcagggcctgctggacctgaggga
gcccctggaagtccaggagatcctggccacccaggaaagccaggtcctgatggtgatttg
ggacttaaaggaatcaaaggtttcccaggcagaccaggaacaaaaggccctccaggtctt
ccaggattcccaggacctcctggaccaatgggtgtaagaggtaaccaaggacacgatggg
attcctggtccagctggagaaaaaggagaaacaggcttgctgggggcccatccaggccca
agagggaaccctggtgctccaggtgccaaaggagacaggggagcccctggttggcccggc
ctccctggcaggaagggaacaatgggagattttgggcctcgaggacccatgggcataaca
ggacccccagggccaccaggtcggcctgggaccatcatccctggccaaaaaggaaatcga
ggtccaccaggttcaagaggatatccaggtgatccaggtccccccggacctccagggagt
catgtaaaatgcataaaaggtgacaaaggatttatgggccagcctggcccaaagggtcta
cctggatctataggtgatatagggccaccaggtcatccgggagcaccaggtaccccaggt
cttccagggctcagaggtgatcctgggttccgtggatttccaggcataaaaggagaaaag
ggtgatccaggatttcagggatcaattggacctccagggccaattgggccgaaaggacca
ccaggtgtccgtggagatcctggcacacttaagatcatctcccttccaggaagcccaggg
ccaccgggcccacctggaccaccagggatgcaaggagaacctgggccagtgggatcacca
ggaaacccaggaccctgtggaccaagaggcaaacctggaaaggatggaaaaccaggaatt
cctggaccagctggagaaaaaggccacaaaggccacaaaggagagcaaggaccgcctgga
tcagatgggttaccgggtttgaagggaaaacctggagacattggcttgcttgcaacggag
acaagaaggaggggctttgtcttcacccgtcacagtcaagcaacagtgatccctgcatgt
ccagaagggacagagccactctacagtgggttttctcttctctttgtacaaggaaatgag
caagcccatggacaagaccttgggactcttgggagctgcctgcagcgatttaccaccatg
ccattcttattctgtaatgtcgatgaagtatgtaattttgcatctcggaatgattattca
tactggctgtcaacaccagctctgatgccaatggacatggctccaattactggaagagcc
ctggagacttttattagcagatgcaccgtctgtgaaggtcctgcgatgaccatagctgtt
cacagccaaaccaccaccatacccccatgtccccatggctgggtttccctctggaaagga
ttttcttttatcatgttcacaagcgcaggttctgagggcgctgggcaagcgctggcatcc
cctggctcctgcttggaggaattccgagccagtccatttatagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggttggcttcgttaaacccagaaaga
atgttcagaaaacctattccatcaactgtgaaagctggagagttagaaaaaataataagc
cgctgtcaggtgtgcatgaagaaaggacactga
DBGET
integrated database retrieval system
