Marmota marmota marmota (Alpine marmot): 107138541
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Entry
107138541 CDS
T09644
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107138541 (Rbm39)
Spliceosome [BR:
mmma03041
]
Common components
Common spliceosomal components
General mRNP proteins
107138541 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
107138541
NCBI-ProteinID:
XP_015336636
Ensembl:
ENSMMMG00000023151
UniProt:
A0A8C6ACF0
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggtcatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgcagtcatgaacgaaagcgaagcaaaagtaaggaacgaaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgggaacggaagcgaagtagaagcaaagaaaggaga
cgtagccgctcaagaagtcgagatcgaagattccgaggacgctatagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagtcctgtgagggaa
cctattgataatctaactcctgaggaaagagatgccaggacagttttctgcatgcagttg
gcagcaagaattcgaccaagagatttggaagagtttttctccacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaagggattgcctatgtggag
tttgtcgatgttagctcagtgcctctagcaataggattaactggccagcgagttttagga
gtgcccatcattgtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgcaggacctatgagactttatgtgggctcattacactttaac
ataactgaagatatgcttcggggaatctttgagccatttggaagaattgaaagtatccag
ctcatgatggatagtgaaacaggtcgctctaagggttatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcctctagtgctagttcgtttttggat
agtgacgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcccagcaggctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgcaacacagtgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagatcaaggatgatgtgattgaagaatgtaataaacatggtggagtc
attcatatttacgttgacaagaattctgctcagggcaatgtgtatgtgaagtgcccctca
attgctgcagctattgctgctgtcaatgcgttgcatggcaggtggtttgctggtaaaatg
ataacagcagcctatgtacctcttccaacttaccacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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