Marmota marmota marmota (Alpine marmot): 107138676
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Entry
107138676 CDS
T09644
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107138676 (Smarcal1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107138676 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107138676
NCBI-ProteinID:
XP_015336838
Ensembl:
ENSMMMG00000017898
UniProt:
A0A8C5ZZ25
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MSLTLTEEQRKKIEENRQKALARRAEKLTAEQPTSTALSSSLAANPSQSKQGYSQNLPKE
PSKKVNDGVIFKQQNLSNSSQGHQRPHHSHHFQLSTPEQATGIWKSQEKKSTACPSHSPP
RQKTLAELSPPLAQSPPNVHNQFLLSYKLDQGHPQTSHKIESTSLANTAHEPLVKAKSSQ
ETPASSSGQPPWDPKLEAKAVKTSTSGQRMSDIHHGSGGVTSRTEGSFQQKLGTSLQKAV
SSTQGKCIRDGDRFRVQIGYNKQLLAVFKSLPSRSYDPATKTWDFNMSDYSALMKAAQRL
PTITLEPLEGVGGSSGGYASLPSAPSLAFVKGRCMLISRARFEVDVSYSEDLIALFKQMD
SRKYDANTRKWNFLLEEHNKLITRVRCLPQVQLDPLPKTLTLAFASQLEKTSLQPAEVPE
ADLSEVDAKLVSTLMPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLL
VVVPSSVRFTWEQAFLQWLPSLSPNQINVVITGKGRLTAGLVNIVSFDLLSKLEKQLKTP
FKVVIIDESHFLKNIKTARCRAAVPILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFF
PQFHAFGLRYCDAKQMSWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKTV
VVSPGRMSARARATLDAAAMEMTQGQTKQQQKEALIVFFNRTAEAKIPCVIEYILDLLES
GREKFLVFAHHKVVLDAITKELERKQVPHIRIDGSTPSADREDLCQQFQLSERHAVAVLS
ITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTNSVGIHYLVAKGTADDYLW
PMIQEKIKVLGEAGLSETNFSEMTEATDYIYKDPTQKTIYDLFQKSFEKDESDKELLEAA
ETFDPGDTDESALTASPPKKSKFEFFDNWDSFTSPF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgacccttacagaggagcagaggaaaaagattgaagaaaatcgacaaaaggct
ctggctcgtagagccgagaagttaacagcagaacagcccacaagcacagccttgagctcc
tctcttgctgccaacccttcccagtccaagcaaggctattcccaaaatctcccaaaagag
ccttctaagaaagtgaacgatggtgtcattttcaagcaacagaatctcagtaattcatct
cagggtcaccaaagacctcatcattcccaccattttcagctcagtacacccgagcaggca
acggggatatggaagagccaagaaaagaagtccacagcctgcccaagccacagcccacca
aggcaaaagactcttgctgaactctctccacctttggcacagagtcctccaaatgtccat
aaccagttcctcttgagctataagttagatcaaggtcatcctcagacttcacataagatc
gaatcaacatcccttgctaacacagctcatgagcctttggtcaaagcaaagagttcccag
gagacaccagcttcttcctctggacagcctccctgggatcctaaattagaggccaaggca
gtgaaaacttccacttcagggcagaggatgtctgatatccatcatggctcagggggtgtg
acatccaggactgaaggaagtttccaacagaaattggggacctcactccaaaaagcagtt
agctctacacagggaaaatgcataagggatggagatcgtttccgggtgcagatcggctat
aataagcagctcctcgcagtgtttaagagtctgcccagcagaagttatgatcctgccacc
aagacgtgggactttaacatgtctgactacagtgctttgatgaaagctgctcagcgcctc
cccacaatcaccctggagccattggaaggggttggtggcagctctgggggatacgccagc
cttccttcagctccgtcccttgcttttgtcaaagggagatgcatgctcatctcccgggcc
cgcttcgaggtagacgtcagctattcagaggacctgatcgctctatttaaacagatggat
tccaggaaatatgatgccaataccaggaaatggaactttctcttggaagaacacaataaa
ctgattacaagggtacgctgcctcccacaagttcagctggatcctctgcccaagactctc
accctggcatttgcttctcagctggaaaagacatctctccaacctgctgaggtccctgag
gcagacctttctgaagtggatgccaagcttgtgtctactctgatgccctttcagagagct
ggagtcaattttgccatagcaaaaagaggtcgcctgctgcttgctgatgacatgggcctg
ggaaagaccatccaagccatctgcatagcggccttttacaggaaggagtggccactcctg
gttgtggtaccgtcctctgtgcgcttcacctgggagcaggcattccttcagtggcttccg
tctctgagcccaaatcagatcaatgtggtaataactgggaagggccgtctgacagctggc
ttggtcaacattgtcagttttgaccttcttagcaagttggaaaaacagctaaagacccct
ttcaaagttgtcatcattgatgaatctcacttcctcaaaaacatcaagaccgcccgctgt
cgagcagctgtgcccattctaaaggttgccaagagggtgatcttactgtcaggcacacca
gccatgtcccggcctgcagagctctacacacagatcattgcagtcaagccaactttcttc
cctcagtttcatgcctttggacttcgctactgtgatgccaagcagatgtcctggggttgg
gactactccggctcttccaacctcggagagctgaagctcttgctggaagaagcggtcatg
ctgcgacgcctcaagtctgacgtcctttcccagctgccagccaaacagcgcaagacggtg
gtggtctccccaggacggatgagtgccagggccagagccaccctggatgctgcagccatg
gaaatgacccagggccagactaaacagcagcagaaagaagccctcattgtcttcttcaac
agaacagctgaagctaaaatcccatgtgtcattgaatacatcctggacctcctggaaagt
ggaagagagaagtttctagtatttgcacaccacaaggtggttttggatgctatcactaag
gaacttgagagaaagcaagtgcctcacatccgcatcgatggctccactccctcagcagac
cgagaggacctgtgccagcagtttcagctgtccgagaggcacgcagtggcagtgctgtcc
atcactgctgccaacatgggcctcaccttctcctccgctgacctggtggtgtttgccgag
ctcttttggaacccaggggtgctgatccaggctgaggaccgggtgcatcgcatcgggcag
accaactctgtgggcattcactacctggtggcaaaaggcaccgcagatgactacctctgg
cccatgattcaagagaagattaaagttctgggagaagctgggctttctgaaaccaatttc
tcagaaatgacagaagccactgattacatctacaaggacccaacgcagaagacaatctat
gacctattccagaagtcctttgagaaagatgaaagtgacaaagagctgctggaggcagca
gagacctttgacccaggagacacagatgaaagcgccttgactgccagtccaccaaagaag
agtaaatttgaattttttgataactgggacagcttcacctctcccttttaa
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