Marmota marmota marmota (Alpine marmot): 107138740
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Entry
107138740 CDS
T09644
Symbol
Farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107138740 (Farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmma01007
]
107138740 (Farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmma03016
]
107138740 (Farsb)
Enzymes [BR:
mmma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
107138740 (Farsb)
Amino acid related enzymes [BR:
mmma01007
]
Aminoacyl-tRNA synthetase
Class II (U)
107138740 (Farsb)
Transfer RNA biogenesis [BR:
mmma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107138740 (Farsb)
Prokaryotic type
107138740 (Farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
107138740
NCBI-ProteinID:
XP_015336939
Ensembl:
ENSMMMG00000021043
UniProt:
A0A8C6A5Q5
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFKALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPIYKRVMPNGEIQKLVVTEETAKIRPF
AVAAVLRNIKFTKDQYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD
IRFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGN
HSKITVNTRNVFIECTGTDFTKAKIVLDIIVTMFSEYCENQFMVEAAEVVFPNGKSNTFP
ELAYRKEIVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH
ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSTKDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPSKDKGGYMIKASEG
PAFFPGRCAEIFARGQSIGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagcgtgaagcgcgatctgctcttcaaagctttgggacggacctacact
gacgaagaatttgatgaactatgttttgaatttggtctggaacttgatgaaattacgtct
gaaaaggaaataataagtaaggaacaaggtaatgtgaaggcagagggggcctctgatgtt
gttctttacaaaatcgacgttcctgccaatagatatgatctcctgtgtctggaaggattg
gttcgagggcttcaggtcttcaaagaaaggataaaagctccaatatataaacgggtaatg
cctaatggagaaattcaaaaactggttgtcacagaagagacagctaaaatacgccctttt
gcagtcgcagcagttctccggaatattaagtttactaaagatcaatatgacagcttcatt
gaacttcaagagaaattacatcagaatatttgcaggaaaagagcattggttgccattggt
actcatgatttggacactttatcaggccctttcacctacactgcaaagcgtccttcagat
atcagattcaagcctctgaataagactaaggagtatacagcctgtgaattaatgaacata
tacaagactgacaaccaccttaaacattacttgcatatcattgaaaataaacctctgtac
ccagttatctatgatagcaatggtgtcgtcctttcaatgcctccaatcatcaatgggaat
cattccaaaataacagtaaatactagaaatgtatttattgaatgcacaggaactgacttt
actaaggcaaaaatagttcttgatattattgtcaccatgttcagtgaatattgtgaaaat
caattcatggttgaagcagctgaggtagtttttcctaatgggaagtcaaatacttttcca
gaactggcttaccgaaaggagatagttagagctgatcttattaacaagaaagttggaatc
agagaaactccggaaaatcttgccaagctcctgaccaggatgtatttaaagtcagaagtc
ataggtgatgggaatcagattgagattgaaatccctccaaccagagctgacattatccat
gcgtgtgatattgtagaagatgcagctattgcttatggatataacaacattcagatgact
ctcccgaaaacatacaccatagctaatcaatttcctcttaataagctcactgaacttctc
agacatgacatggcagcagctggattcactgaagcacttacctttgctctgtgctcccaa
gaagatattgctgataaacttggtttggatatctctgcaacaaaggcagtccacataagt
aaccctaaaacagctgagtttcaggtggcacgcactacccttcttcctggcctcttaaag
accatagcagcaaatcggaagatgcctcttcctctgaaactgtttgaaatctctgacatt
gtagtaaaagattctaccaaagatgtaggtgcaaaaaactacaggcatctctgtgctgtt
tattacaacaagaatcctgggtttgagataatccatgggctactggacagaattatgcag
ctgcttgatgtacctcctagtaaagataagggaggctacatgatcaaagcgtcagaaggc
cctgctttcttccctgggcgatgtgctgagatctttgccaggggtcaaagcattgggaag
ctcggagtccttcatcctgatgttatcaccaaatttgagctgaccatgccctgctcctcc
ctggaaatcaatattgagccttttttgtga
DBGET
integrated database retrieval system
