Marmota marmota marmota (Alpine marmot): 107138754
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Entry
107138754 CDS
T09644
Symbol
Col4a4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04382
Cornified envelope formation
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04820
Cytoskeleton in muscle cells
mmma04926
Relaxin signaling pathway
mmma04933
AGE-RAGE signaling pathway in diabetic complications
mmma04974
Protein digestion and absorption
mmma05146
Amoebiasis
mmma05165
Human papillomavirus infection
mmma05200
Pathways in cancer
mmma05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107138754 (Col4a4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107138754 (Col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107138754 (Col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107138754 (Col4a4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107138754 (Col4a4)
09154 Digestive system
04974 Protein digestion and absorption
107138754 (Col4a4)
09158 Development and regeneration
04382 Cornified envelope formation
107138754 (Col4a4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107138754 (Col4a4)
09162 Cancer: specific types
05222 Small cell lung cancer
107138754 (Col4a4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107138754 (Col4a4)
09174 Infectious disease: parasitic
05146 Amoebiasis
107138754 (Col4a4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107138754 (Col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107138754 (Col4a4)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107138754 (Col4a4)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107138754 (Col4a4)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107138754 (Col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107138754
NCBI-ProteinID:
XP_015336955
Ensembl:
ENSMMMG00000000139
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MVSFRWTKPLVTDPGYLILILFSVQHVYGGGKKYIGPCGGRDCSICQCFPDKGSRGQPGP
LGPQGPIGPLGPPGPIGIPGEKGLRGDVGLPGAAGEKGDKGPTGVPGFPGLDGVPGHPGP
PGSRGKPGLNGYNGSRGDPGFPGHRGAPGSGGPPGLPGEYGEKGDSVFILGIIKGIRGDR
GDPGPPGLPGPRGTRGPAGPMGYPGAPGLVGLPGHPGNPGLKGNPGVGVKGQMGDPGEVG
QQGFPGPTLLIEPPDSSLYKGEKGIKGIRGMTGLPGPPGHKGEPGIGEKGEKGIPGFPGP
RGDPGSYGSPGFPGLKGEQGPVGDPGLFGFLGPKGDPGDRGYPGPPGVLVTPSLPLKGPP
GDPGFPGRYGEMGAVGPPGPPGHPGRPGDTCPGMVGPPGPPGFPGPPGFPGLAGIPGRPD
SAPGKPGRPGLPGQAGAPGLQGRPGSDAIYCSAGHPGPPGIKGKVGPPGGRGSKGEKGNE
GLCACQPGPVGPPGPPGLPGRQGSKGDLGLPGFLGERGDPGPPGPEGSPGPPGKPGASGR
PGDKGAKGDMVVSRVKGHKGERGPDGPPGFPGEHGQHGQDGHAGEKGDPGPRGDHEDAAP
GGKGFPGLPGSPGKAGPVGPPGLGFPGPPGERGPPGVPGHPGLRGPSGLKGQKGDTILCN
VTYPGRPGSPGSDGPPGLKGFPGPPGAPGPRCPDGQKGQRGKPGIPEIPGPPGFRGDMGD
PGLGGEKGSSLIGPPGLPGPPGVKGQKGIPGDPAFGPPGPPGDRGLSGVPGMKGPKGQPG
CPGTEGVAGVPGLPGLKGPKGRGGISGFPGIPGEPGHSCERGAPGIPGQPGLPGAPGSPG
APGWKGQQGDMGPPGPAGMKGLPGLPGLPGSGGLPGPPGIPGPFGEDGLPGLPGPKGPQG
LPGFAGFPGERGKPGPEGQRGRKGETGAKGWPGFPGEQGARGVKGARGPPGNEGEMAIIS
KKGKPGEAGPPGDNGFPGERGDTGSPGMQGRRGEPGRHGPPGFHRGEPGRNGQHGLPGSP
GPPGSPGLRGIIGFPGFPGDQGEPGYPGPPGFSGIDGARGPKGSKGEPASQRGPPGPKGD
PGSPGCQGHVGAPGDQGLPGVQGLKGPSGKPGLPGSLGPPGCPGDQGMPGQKGHPGEMGE
PGSTGLRGDPGLPGPPGIKGPSGSPGLDGLHGLKGQKGSKGASGLHEMGPPGPVGLPGLK
GETGDPGSPGISPPGLFGEKGLPGPPGRPGPPGPAGVPGRPPKGDIPDPGPPGDQGPPGP
DGARGAPGPPGPPGSVDCLRGEPGDCGLPGPPGPPGPPGPPGCQGVPGCDGKDGQKGPMG
FPGPPGPPGLLGPPGEKGLPGPPGRKGPTGPPGPRGEPGPPADVDACPRIPGLPGVPGTR
GPEGAVGLPGQRGPPGLGCKGEPGLDGRRGDDGVPGPPGPPGHKGDAGEAGCPGAPGPPG
SPGDPGPRGVGPGYLSGFLLVLHSQTAQEPSCPVGMPQLWTGYSLLYLEGQEKAHNQDLG
LAGSCLPMFSTLPFAYCNIHQVCHYARRNDKSYWLASAAPLPMMPLAEEDIRPYISRCAV
CEAPAQAVAVHSQDQTIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRA
APFLECQGRQGTCHFFANEYSFWLTSVQPDMQFSSAPSPDTLKEGQAQRQKISRCQVCMK
YS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctttcagatggaccaagcccttggtcacagatcctgggtaccttatacttatt
ctcttttctgtacaacatgtatatggaggtggaaagaaatacatcggtccttgtggagga
agagattgctccatttgccagtgctttcctgataagggctctcggggtcaaccaggacca
ctagggccacagggtccaatagggcccttggggccccctgggcccattgggattccagga
gagaaaggactgagaggtgacgttggccttccaggagcagcaggggagaaaggagataag
ggtccaactggtgttcctggatttccaggtttggatggtgtacctggtcacccagggcct
cctggatccagaggcaaacctggcttgaacggctacaatggctcaagaggtgatccaggg
tttccaggacacagaggagctcctggctcgggaggccccccaggccttcctggagaatat
ggagaaaaaggagattcagtgttcattttaggtatcattaaaggtattcggggagacaga
ggggacccaggaccacctggcttaccaggacctaggggtacaagaggaccagccggcccc
atgggatatcctggagcaccagggttagtgggacttccgggccatcctgggaatccaggt
ttgaagggcaatcctggtgtaggagtgaaaggtcagatgggagacccgggtgaggttggc
cagcaaggttttcctggacccaccttattgatagagccccctgattctagtctctacaaa
ggagagaagggtataaaaggaattcgtgggatgactggattgccgggaccaccaggacat
aagggagagcctggtattggtgaaaaaggagagaagggtattcctggattcccaggacct
cggggtgaccctggttcctacggatctccaggttttccaggattaaagggagaacaagga
ccggttggagatcctgggctgtttggatttcttggcccaaagggggatcctggagaccgt
gggtaccctggaccaccaggtgttttggtaactccatctcttccactcaaaggtcctcca
ggggacccagggttccctggccgctatggagaaatgggggctgttggaccaccgggtccc
ccaggtcaccctggcagaccaggagacacttgtccaggcatggtgggaccccctgggcca
ccagggtttcctggtcctccagggtttcctgggctagcgggtattcctgggagacccgac
tctgccccaggaaagccggggaggccaggactacctggccaggctggagctccagggctg
cagggacgcccaggatcagatgcgatatattgtagtgctgggcacccgggaccaccagga
ataaagggcaaagtaggtcccccaggaggaagaggctcaaaaggagaaaaaggaaatgaa
ggactctgtgcctgccaacctggtcctgtgggcccgcctggccctccaggacttcctggg
aggcaagggagtaaaggagacttaggactgcctggctttcttggagaaagaggtgaccca
ggccctcctggtcctgaaggatctccagggccaccaggaaaacctggtgcttcgggacgc
cctggtgacaaaggagccaaaggtgacatggttgtatccagagttaaagggcacaaagga
gaaagaggacctgatgggcccccagggtttccaggagagcacgggcaacatggtcaggat
ggacatgctggagaaaagggggatccgggaccccggggggatcatgaagatgcagcccca
ggtggtaaaggttttcctggactaccaggctcccctgggaaagcaggacctgtggggcct
ccaggactgggatttcctggtccaccgggagagagaggtccaccaggagttccaggccac
ccaggtctgagggggccctctggcttgaaggggcagaaaggtgacaccatcctttgtaat
gtaacctatcctgggaggcccggctctccaggttctgatggacctccaggtctgaaggga
tttccaggtcctccgggggctcctggaccaaggtgtccggatgggcagaaaggccaaagg
ggcaaaccaggaataccagaaataccaggtccacctggttttcgtggtgacatgggtgat
ccaggcttgggaggtgaaaagggatcctcccttattggacccccgggccttcctgggcca
cccggagtgaaaggtcagaaaggaatccccggagatcctgcatttggccccccaggaccc
cctggagacagaggtctttcaggagttccagggatgaaaggacccaaaggccaacctgga
tgcccagggacagaaggggtagctggtgttcctggactcccaggtctgaaaggtcccaaa
ggcagaggaggaatttctggatttccaggtatcccaggggagcctggtcattcctgtgag
agaggtgcaccaggaatcccaggccaaccaggactccctggggctccaggtagtccaggt
gccccaggttggaaagggcagcaaggagatatggggcctcctgggccagctggaatgaag
ggcctccctgggctcccaggattgccagggtcaggtggactcccaggacctccaggaatc
ccaggaccctttggggaagatgggctgcctggtcttccaggcccaaagggaccccagggg
ctgcctggcttcgcaggttttcccggagagagaggaaaaccaggtccagaaggacaacgt
ggcagaaagggagagactggagccaagggctggcctggcttcccgggagagcagggggca
agaggtgtcaaaggagcaagaggacctcctggaaatgaaggagagatggccatcatttcc
aagaaggggaaacctggggaagctgggcctcctggggacaatggcttcccaggagagaga
ggtgatacaggaagtcctggaatgcaagggagaagaggagagccaggaagacatggccca
cctggattccacagaggggagcctggtcgaaatgggcagcatgggcttcctggatcccct
ggtcctccaggctcacctggcctaagagggatcattggctttccagggtttccaggagac
cagggtgagccgggttatccaggcccccctggattttcaggaattgatggagcaagagga
cctaaaggaagcaaaggtgagcctgccagccagcgtggcccacctggtcctaagggtgac
ccaggcagccctggatgtcaaggacatgttggagcccctggagatcaaggccttcctgga
gttcaaggactgaaaggaccatcaggaaagccaggcctgcctggctcgttgggaccacca
gggtgtccaggtgatcaggggatgcctgggcagaagggccatccaggagaaatgggagag
cctgggtccacaggtctccggggggatccagggctaccaggacctccaggaataaaaggt
ccttcggggtctcctggcctggacggcttgcatggtttgaagggtcagaaaggaagcaaa
ggtgcctcaggtttacatgaaatgggcccacccggtccagtgggactccctgggctaaaa
ggggagacaggagaccctggaagcccaggaatttctcctcctggcctttttggtgaaaaa
ggtctcccaggtcccccagggagacccggaccacctggtccagcaggcgttccaggaaga
cctcctaagggtgacattcctgacccaggtccacctggagatcagggacctcctggccct
gatggtgcaagaggagcacccgggcctccaggacctcctgggagtgttgactgcctgaga
ggggaaccaggtgactgtggtctgccagggccaccggggccaccaggtcccccaggccct
ccagggtgccagggtgttccaggatgtgatggaaaagatggccaaaaaggaccaatgggg
tttccagggcctccagggccacctggtcttctggggccacctggagagaagggtttacct
ggacctccaggtagaaaagggcccacaggtcctccaggtcccagaggtgaaccagggcca
cctgcagatgtggatgcctgtccccggatcccagggcttcctggagtgccaggcacaaga
ggaccagaaggagctgtggggctcccaggacagagaggccccccaggactagggtgcaaa
ggagaacctggactggatggcaggaggggcgatgatggtgtccctgggcctcctggacct
cctggacacaaaggtgatgctggagaggctggttgccctggagccccaggccctcctggt
tcccctggtgatcctgggcccagaggagttggccctggatacctcagtggcttcctccta
gtactccacagtcagacagctcaagaaccctcctgccctgtgggcatgccccagctctgg
actgggtatagtctgttatacctggaaggccaagagaaagctcacaatcaagaccttggt
ctggcggggtcttgccttccgatgtttagcaccctgccctttgcctactgcaacatccac
caagtgtgccactacgcccggaggaacgacaagtcctactggctagccagcgcagcgccc
ctccccatgatgcccctcgcagaggaggacatccgcccgtacatcagccgctgtgccgtg
tgcgaggccccagcacaggcggtggcggtgcacagccaggatcagaccatccccccgtgt
ccacgggcctggaggagcctctggatcgggtactccttcctgatgcacacaggagctggg
gaccaaggaggagggcaggccctcatgtcgcctggcagctgcctggaagatttcagagcg
gcaccgttccttgaatgccagggccggcagggaacttgccactttttcgcaaatgagtac
agcttctggctgacgtcggtgcaaccagacatgcagttttcctccgccccctcaccagac
accttgaaagaaggccaggcccagcgccagaaaatcagcaggtgccaggtctgtatgaag
tatagctag
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integrated database retrieval system
