Marmota marmota marmota (Alpine marmot): 107138907
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Entry
107138907 CDS
T09644
Symbol
Sorcs2
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS2
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107138907 (Sorcs2)
Membrane trafficking [BR:
mmma04131
]
Protein recycling
Others
Others
107138907 (Sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
107138907
NCBI-ProteinID:
XP_048640079
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MAHRGAPQRFPKSPSPAARAPSRGAPPLLRWPRSRPFLLLLLLLAACGAAGRSPEPRRLG
PRAQLTRVPRSPPAGRTEHSGREDRQTRGAEPGALGPDPSPAPGPGEPGAPALGKGRWAR
AAPVDGVASRAQVSLISTSFVLKGDATHNQAMVHWTGENSSVILILTKYYHADMGKVLES
SLWRSSDFGTSYTKLTLQPGVTTVIDNFYICPTNKRKIILVSSSLSDREQSLFLSTDEGA
TFQKQPITFLVETLIFHPKEEDKVLAYTKENKLYVSSDLGKKWTLLQERVTKDHVFWAVS
GVDTDPNLVHMEAQDLSGGFRYVTCQIHNCSDKTLTAPFTGPIDHSSLTVQDDYVFFKAP
SAAQHRAHLAWRARVQIQMAXPQGSQGGRGRAGPDPATVPQDLQIISTDESQVFVAVQEW
DQVDTYNLYQSDPRGVHYTLVLENVRSSRQAEESVVIDVLEVRGVKGVFLANQKIDGKVT
TLITYNKGRDWDHLRPPSTDMNGKPTHCQPPDCHLHLHLRWADNPYVSGTVHTKDSAPGL
IMGAGNLGSQLVEYKEEMYITADCGRSWRQVFEEEHHILYLDHGGVIAAIKDTSIPLKIL
KFSVDEGLTWSTHNFTSTSVFVDGLLSEPGDETLVMTVFGHISFRSDWELVKVDFRPSFS
RQCSEEDYSSWDLTNLQGDGCIMGQQRSFRKRKPTSWCVKGRSFTAALKSRVCPCRDSDF
LCDYGFERSPSPESANKCSANFWFNPLSPPEDCALGQTYTSSLGYRKVVSNVCEGGVDLQ
QSPVQLQCPLTPPRGLRVSIHGEAVAVRPGEDVLFMVRQEQGDVLTTKYQVDLGDGFKAM
YVNLTLTGESIRHRYESPGVYRVSVRAENMAGHDEAVLFVQVNSPLQALYLEVVPVVGIN
QEVNLTAVLLPLNPNLTVFYWWIGHSLQPLLSLDNSVTTRFADAGDVRVTVQAACGNSVL
QDSRVVRVLDQFQVVPLQFSKDLDAYNPSTPEWREDVGLVVTRLLSKETSIPEELLVTVV
RPGLPTLADLYVLLPPPRPTRKRSLTSDKRLSAVQQVLGAHNISFLLRGGLRILVGLRDT
SSDSQSLGGGGGYWAVVVLSVTVLFAVGAFILYKFKRKRPGRTVYAQMHNEKEQEMTSPV
SHSEDVQGATQGNHSGVVLSINSREMHSYLVS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccggggggccccccagcgcttcccgaagagccccagccccgccgcccgagcc
ccgagccgcggggcgcctccgctgctgcgctggccgcgctcgcggccgttcctgttgctg
ctgctgctgctggccgcttgcggggcggccgggcgctccccggagcccaggcgcctgggt
ccccgcgcgcagctgacccgagtgccgcggagcccgcctgcgggacgcacggagcacagc
ggccgcgaagaccggcagacgcgcggtgcggagccgggcgccctgggtccggatcccagt
cctgctccgggtcccggtgagcccggcgcccccgctttgggcaaggggcgatgggcgcgc
gcggcgccagtggacggagtggcttcgcgggcgcaggtctcgctcatcagcacgtcgttc
gtgctcaagggggacgcgacacacaaccaggcgatggtgcactggacgggcgagaacagc
agcgtgatcttgatcctgacgaagtactaccatgcagacatggggaaggttctggaaagt
tctctgtggcggtcttcggatttcgggacgtcctacaccaagctcaccctccagcctggc
gttaccaccgtcattgacaacttctacatttgccccaccaacaagagaaagatcatcctg
gtgagctcctcgctcagcgaccgcgagcagagccttttcctgagcaccgacgagggcgcc
accttccagaagcagccgatcaccttcctggtggagaccctcatcttccaccccaaggag
gaggacaaggtcctcgcctacaccaaggagaacaagctctacgtgtcatctgacctgggg
aagaagtggacgcttctgcaagagcgcgtgaccaaagaccatgtgttctgggctgtgtct
ggggtagacaccgaccccaacctggtccacatggaagcccaggacctcagtggaggtttt
cgctatgtcacctgccagatccacaattgctccgataagacactaacagccccgttcaca
ggccccatcgaccacagctcgctgaccgtgcaggatgattacgtcttctttaaggcccct
tcagctgcgcagcatagggcccacctcgcgtggagagccagggtgcagatccagatggct
tgaccccaagggagccagggaggccgcggccgtgccggccctgaccccgccactgtcccc
caggacctgcagatcatcagcacggacgagagccaggtgttcgtggcagtgcaggagtgg
gaccaggtggacacctacaacctgtaccagtcggacccgcgcggagtgcactacacgctg
gtgctggagaacgtgcgcagctcgcggcaggccgaggagagcgtggtcatcgacgtcctc
gaggtcagaggggtgaaaggggtcttcctggccaaccagaagattgacgggaaggtgacg
acgctcatcacctacaacaagggccgcgactgggaccacctgaggccgcccagcaccgac
atgaacgggaagcccacccactgccagccccctgactgtcacttgcatctgcacctgcgc
tgggcagacaacccctatgtgtcgggcaccgtgcacaccaaggacagcgccccaggcctc
atcatgggagcaggtaacctgggctcacagctggtggagtacaaagaggagatgtacatc
acagcggactgcgggcgcagctggcggcaggtgttcgaggaggagcaccacatcctctac
ctggaccacggcggggtcatcgcagccatcaaggacacctccatccccctgaagatcctc
aagttcagcgtggacgagggcctcacctggagcacgcacaacttcaccagcacctccgtg
ttcgtcgacggcctgctgagcgagcctggggacgagactctggtcatgacggtcttcggc
cacatcagcttccgctccgactgggagctggtcaaggtggacttccggccctccttctct
aggcagtgctctgaggaggactacagctcctgggacctcaccaacctccagggcgacggc
tgcattatgggccagcagagaagtttccggaagaggaagcccacgtcctggtgtgtgaag
gggcggagcttcacggcggccctcaagtcccgcgtgtgcccgtgccgggactcggacttc
ctctgtgactacgggtttgagcgctcaccctccccggagtcggccaacaagtgctctgcc
aacttctggttcaatcccttgtcacctcctgaggactgcgccctgggccagacctacacc
agcagcctcgggtaccgtaaggtggtgtccaacgtgtgcgagggtggcgtggacctgcag
cagagccccgtgcagctccagtgccccctcaccccaccccggggcctgcgggtgagtatc
cacggcgaggccgtggccgtgcggcccggagaggacgtgctgttcatggtgcggcaggag
cagggagatgtcctgaccaccaagtatcaggtggaccttggggatggcttcaaggccatg
tacgtgaacctcacactaactggagagtccatccggcaccgatacgagagtcctggcgtc
taccgcgtgtctgtcagggcagagaacatggcggggcacgatgaggcggtgctgtttgtc
caggtcaactcccccctgcaggcactctacttggaggtggttcctgtcgttggcatcaac
caggaggtgaacctcaccgctgtgctgctgcccctgaaccccaatctcactgtcttctac
tggtggattggccacagcctgcagcccctgctctccctggataactctgtgaccacgcgg
tttgcagacgcgggtgacgtgcgggtgacggtgcaggctgcctgcgggaactctgtgctg
caggactcgagggtggtacgcgtgcttgaccaattccaggtggtgcctctgcagttctcc
aaggacctggacgcctacaaccccagcacgcccgagtggagggaggacgtgggcctggtg
gtcacccggctgctctccaaggaaaccagtattcccgaggagctgctggtgaccgtggtg
aggcctgggctgcccaccctggctgacctgtacgtgctcctgccacctcccaggcccacg
aggaagaggagcctcaccagtgacaagaggctctcggccgtccagcaggtgctgggcgca
cacaacatcagcttcctcctgcggggaggcctccgcatcctggtgggcctgagggacacc
agctcagattctcagagcctgggcggcggcggcggctactgggccgtggtggtcctctcc
gtcaccgtgctgttcgcagtgggagccttcatcctctacaagtttaaaaggaaacgcccg
ggcaggaccgtgtacgcccagatgcacaacgagaaggagcaggagatgacgagccccgtg
agccacagcgaggacgtgcagggcgccacccagggcaaccactcgggcgtggtcctgagc
atcaactcccgggagatgcacagctacctggtgagctga
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