Marmota marmota marmota (Alpine marmot): 107138925
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Entry
107138925 CDS
T09644
Symbol
Dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107138925 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107138925 (Dhx15)
03009 Ribosome biogenesis [BR:
mmma03009
]
107138925 (Dhx15)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107138925 (Dhx15)
Spliceosome [BR:
mmma03041
]
Complex A
U2 snRNP components
U2 related factors
107138925 (Dhx15)
Complex B
107138925 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107138925 (Dhx15)
Ribosome biogenesis [BR:
mmma03009
]
Eukaryotic type
90S particles
Helicases
107138925 (Dhx15)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
DUF3915
Motif
Other DBs
NCBI-GeneID:
107138925
NCBI-ProteinID:
XP_048639930
Ensembl:
ENSMMMG00000017227
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MMNLNSKIFVLRKERDRDRDREDRSKDRDRERDRGDREREREKEKEKELRASTNAMLISA
GLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTNLPHTPRYYDILK
KRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQ
PRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLE
RYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTI
PGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKRE
VDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDG
VVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKT
EMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDD
GDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADE
AKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFN
LPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPE
WVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEY
SQY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatctgaattctaaaatttttgttcttaggaaagaacgagatcgagaccgggat
cgtgaagatcggtctaaagatcgggaccgagaacgtgatagaggagatcgagagcgggag
agggagaaagaaaaggagaaggaattgcgagcttcaaccaatgctatgcttatcagtgct
ggattaccacctttgaaagcttcccattcagctcattcaacccactctgctcattcaaca
cattcgacacattctgctcattcaacacacactggacatgcaggacacacatcacttcca
cagtgcattaatccattcaccaatttaccccacacacctcgatactatgatattctaaag
aaacgacttcagctccctgtttgggaatacaaggataggtttacagatatcctggttaga
catcagtcatttgtgctggttggcgagactgggtctggtaagacaacacagattccacag
tggtgtgtggagtatatgcgatcattaccgggacccaagagaggagttgcctgtacccaa
cccaggagagtggctgcaatgagcgtggctcagagagttgctgatgagatggatgtgatg
ttgggccaggaagttggttattccattcgatttgaagactgcagtagcgcaaaaaccatc
cttaagtatatgactgatgggatgttacttcgtgaagccatgaacgatcccctcctggaa
cgttacggtgtgataattcttgatgaggctcatgaaagaacactggctacagatattctc
atgggtgttttaaaagaagttgtaagacagagatcagacttaaaggttatagttatgagt
gctactctagatgcgggaaaattccagatttactttgataactgtcctctcttaactatt
cctggccgcacgcatcctgttgagatcttttatactccagaaccagagagagattatctt
gaagcagcaattcgaacagtgatccagatacatatgtgtgaagaggaggagggagatctt
ctactttttttaactggtcaagaggaaattgatgaagcctgtaaaagaataaagcgtgag
gttgatgatttgggtcctgaagttggtgacattaaaatcattccactgtactctacactt
ccaccccagcagcagcaacgcatttttgaacctccacctccaaaaaaacagaatggagcc
attggaagaaaggtagttgtgtcaactaacattgcagagacatcattgacaatagatggt
gtggtatttgtgattgatcctggatttgcaaaacagaaggtatacaatcctcgaatcaga
gttgaatctcttttggtgacagctattagtaaggcttcagctcaacaaagagctggtcga
gctggacgtaccagacctgggaaatgcttcaggctttacacagaaaaagcttataaaaca
gaaatgcaggataacacctatcctgagattttgcgttctaatttaggatcagttgtgtta
caattgaagaaacttggtattgatgatttggtgcattttgattttatggatccaccagct
cctgaaactctgatgagagccttagaacttttgaattatctggctgctttaaatgatgat
ggagatctgactgaattgggatccatgatggcagagtttcctctagatccacagctcgct
aaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctattactgct
atgttgtcagtcccacagtgttttgttcgccccacggaggccaagaaagctgcagatgag
gccaagatgagatttgcccacatagatggagatcatctgacactgctgaatgtctaccac
gcttttaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaactaccgg
tccctgatgtccgcagacaatgtacgccagcagctatctcgaattatggatagatttaat
ttgcctcgtagaagtactgactttacaagcagggactattatattaacataagaaaagct
ttggttactgggtattttatgcaggtggcacatttagaacgaacagggcattacttaact
gtgaaagataaccaagtggttcagttgcacccctctactgttcttgaccacaagcctgaa
tgggtgctttataatgagtttgttctaactacgaagaattacatccggacatgtacagat
atcaagccagaatggttggtgaaaattgcccctcaatattatgacatgagcaatttccca
cagtgtgaagcaaagagacagttggaccgcattattgccaaacttcaatccaaggaatat
tcacagtactga
DBGET
integrated database retrieval system
