Marmota marmota marmota (Alpine marmot): 107139105
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Entry
107139105 CDS
T09644
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107139105 (Sh3tc1)
Membrane trafficking [BR:
mmma04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
107139105 (Sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
SH3_1
TPR_7
TPR_NPHP3
SH3_9
TPR_2
Csd3_N
TPR_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
107139105
NCBI-ProteinID:
XP_048640053
Ensembl:
ENSMMMG00000014397
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MRQRPTGHAEASALGPGRVMKSPKEETTGEPAEMGWGPARPSGGHSSGHEVQSGAMRSPC
GREQAGPEEAKAPVRGDLALQLLAVRRKSGQPDPGLQQALRGRLRLLENESQEVARVLGE
LSARLLSIHSDQDRIMVTFKTFEEIWKFSTYHALGFTHHCLENLLVDRAFWLLWPGEEEE
TAIQVHVEEDALRRTHQSLLAQEGPFFVLCPDHHVRLTTGRQSVGKGPQVLRKASGHSLG
DVALEADSSSPIPTTSGAVTVAAPEPLVPFHQWAAPRGGPWALPGLRAQECAAHSPHQAP
SEALQGGSGQLHPQEGGKRRFAHTETECRWALRAPWGPADDSVGGPVTPDSSLMGLGQAS
AVADFQGSGPEEVSFQAGDLLEILGAQVPSLPWCVGRHMASGQVGFVRTSHISMQGPVSE
LESVVFLDEGERLFFSSEGHLSEDTAQRLLSRMAGTEVCSVHSLDRLAEAEGMQPEEREM
PLPGLNPEPQETLRTVKDVLEQCKTFPGCPEEEPEARGLQEASGCVSSPDTEEPPFCLLP
EDSGTDPEALGSLLQTLNAPGYQACFRGLYDACLPWLGSMFCSFADEEELAGLLARAREM
AKKAGLGMALARLCFLLGRLCARKLKLSQARVYFEEALRARGGCFEDLFLVVAVYANLAT
IYMKQKSREKCAQVVPKAAALLLGTPSHICSTEAEAELLRYALRSAISGGSPQAEARACF
LLARHHTHLKQPEEALPYLERLLLLHRGLGAPPAAWPLSCYLLLADTYSRKCLPHLALSC
IRVASLRTPGSLASSLRSVDLVLWNAPRLHGQRTAAHSLPAQAAHYLRQALASTAAGTGR
ALRGLLYASLAQLHSHHEQHGQAIAFMMRAVEADAVAGARPVVDRLVVLAWLHLLHRQSL
VALDILQSILDADVASEDQEGVIVNMAAIALKRTGRTRQAAEGYYRALRLARGLGQLRNQ
AVVLANFGALCLQVSAIGLAQHYLLEAIRLFSQLPVGECGQDFTQVLLWTGHLCTRRALA
QQGKCYYQWAFLVAVETGHLESQLQAVQQLCHFYSSVMPNEAQSVIYHEFQLTLARRIAD
KVLEGQLLEAISHLYLSLGTERAYKSALDYTKRSLGIFIDLQKKEKEAYAWLQAGKIYYI
LRQNELVDLYIQVAQNAALYTGDPNLGLELFEAAGDIFFNGSWEREKAVSFYRDRALPLA
VTVGNREAELRLCNKLVALLAALEAPQEGLEFAHEALALSITLGDRLNERVAYHRLAALH
HRLGHGELAEHFYLKALSLCSSPLEFEEETLYYVKVYLALGDIIFHDLKDPFDAAGYYQL
ALAAAVDLGHKKAQLKIYSRLATIYHHFLMDREMSLFFYQKARTFASELNARRTNLVPQS
FCSRAPWLAPGHLP
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaacggccaactgggcatgccgaggcctcagcactggggccagggcgggtcatg
aagagccccaaggaggagaccactggggagccagcggagatgggctgggggcctgcaaga
ccctctggaggccacagcagcgggcacgaggtccagagtggggccatgcgctcaccctgt
ggccgggagcaggctgggcctgaggaggccaaggcgccagtccgaggtgacctggctctg
cagctgctggccgtgcggaggaagagtggacagccagaccccggcctgcagcaggccctg
cggggccggctgcgcctgctggagaacgagagccaggaggtggcccgcgtgctgggggaa
ttgtcagccaggctgttgtctatccacagtgaccaggatcggatcatggtgacgtttaag
acttttgaagaaatctggaagttttccacctaccatgctcttggcttcacacatcactgc
ttggaaaacctgctggtggaccgggccttctggctgctgtggccaggcgaggaggaggag
acggccatccaggtgcacgtggaggaggacgccttgaggcggacgcaccagagcctgctg
gcccaggaagggcctttctttgtcctgtgtcctgaccaccatgtgagactgacgactggc
cgccagagtgtggggaagggcccccaggtcctcaggaaggcttcggggcactccctgggg
gacgtggccctggaagcggactcttcaagccccattcccaccacatctggggcggtgaca
gtggctgccccggagcccttggttccgttccatcagtgggcagcgcctcgagggggcccg
tgggctctcccgggactcagggcacaggagtgtgcagcacacagccctcatcaggccccc
tcggaagccctccagggaggctcaggacagttgcacccgcaggaaggaggcaaacggaga
tttgcccacacagaaacggagtgcaggtgggcccttagggccccctggggccccgctgac
gactccgtgggtggacctgtgacacctgacagctcactgatggggcttggccaggcctca
gcggtggcggacttccagggctcagggcctgaagaggtgtccttccaggccggcgacctc
cttgagatcctgggtgcccaggtgcccagcctgccctggtgcgtgggccggcacatggcc
tcaggccaggtgggcttcgtgcggaccagccacatcagcatgcagggcccggtgtctgag
ttggagagtgtggtcttcctggacgagggagagaggctgttcttcagcagcgaggggcac
ctttcggaggacaccgcccagcgcttgctgagcaggatggcgggcaccgaggtctgctcc
gtgcacagtctggaccgcctggcagaagcagagggtatgcagcctgaggagcgagaaatg
cctctacccggcctcaaccccgagccccaggagaccctgcggacagtgaaggatgttcta
gaacaatgcaagaccttcccaggctgccctgaggaggagcccgaggccaggggtctccag
gaggcttctggctgcgtgagctcccccgacaccgaggagccccccttctgcctgcttccc
gaggacagtgggacggacccagaggccctgggctcgctgctgcagaccctgaatgcccct
gggtaccaggcctgcttccgtggcctgtatgacgcctgcctgccatggctgggcagcatg
ttctgcagctttgctgatgaggaggagctggccgggctcctggcacgggcccgggagatg
gccaagaaggctggccttggcatggcactggccagactctgcttcctcctgggacggctg
tgtgcccggaagctcaagctctcccaggcccgcgtgtactttgaggaagccctgagggcg
cgcgggggctgctttgaggacctcttcctggtggtggccgtgtatgcaaacctggccacc
atctacatgaagcagaaatccagggagaagtgtgcccaggtggtgcccaaagctgcggcc
ctgctcctgggcacgcccagccacatctgcagcaccgaggcagaggcggagctcctgcgg
tacgcgctgcggagcgccatcagcggtgggagcccgcaggccgaggcccgggcctgcttc
ctgctggccaggcaccacacccacctcaagcagccggaggaggccctgccctacctggag
aggctgctgctgctgcacaggggcttgggcgccccgcccgccgcctggcctctgagctgc
tacctgctcctggccgacacctacagcaggaagtgcctgccccacctggctctgagctgc
atcagggtggcctcgctgcggaccccaggctcgctggccagctccctgaggagcgtggac
ctggtcctctggaacgccccccggctgcacggccagaggacggcggctcacagcctccct
gcccaggccgcccactacctcaggcaggcactggcctccacagccgcaggcacggggcgg
gcccttcgcggcctgctctatgccagcctggcccagctgcacagccaccatgagcagcac
gggcaggccatcgccttcatgatgcgggcggtggaggccgacgccgtggccggtgcgcgc
cccgtggtggaccgcctggtggtgctggcctggttgcacctgctccacaggcagagcctg
gtggccctggacatcctgcagtccatcctggatgcagatgtggccagcgaggaccaggag
ggtgtgattgtcaacatggcggccatcgccctgaagaggacgggcaggacccggcaggcg
gccgagggctactaccgcgccctgcgcctggctcggggcctgggccagctgcggaaccag
gcagtggtcctggccaacttcggggcgctgtgtctgcaggtcagtgccatcgggctggcc
cagcactacctcctggaggccatcagactcttctcacagctgcccgtcggggagtgtggt
caggacttcacgcaggtgctcctgtggactggccacctgtgcacccgccgggccctcgcc
cagcagggcaagtgttactaccagtgggcctttctggtcgctgtggagacgggccacctg
gagagccaactgcaagccgtccagcagctgtgccacttctatagcagtgtcatgcccaat
gaggcacagagcgtcatctaccatgagttccagctcacactggcccgcaggatagccgac
aaggtgttggagggacagctcctggaggccatcagtcatctgtacctgtcactgggcact
gagcgggcctacaaatccgctctggactacaccaagcggagcctagggatattcatcgac
ctgcagaagaaggagaaggaggcctatgcctggctgcaggcagggaagatctactacatc
ctgcggcagaacgagctggtggatctgtacatccaggtggcgcagaatgcggccctgtac
acgggggaccccaacctggggctggagctgttcgaggcggccggagacatcttcttcaat
ggcagctgggagcgggagaaggctgtgtccttctatcgggaccgggcgctgcccctggcg
gtcaccgtggggaaccgggaggcggagctgcggctgtgcaacaagctggtggccctgctg
gctgcgctggaggccccgcaggagggcctggagttcgcccacgaggccctggctctcagc
atcaccctgggcgaccggctgaacgagcgagtggcctaccaccggctggccgccctgcac
caccggctgggccacggcgagctggccgagcacttctacctcaaggccctgtcgctctgc
agctcgccgctggagttcgaggaggagacgctgtactatgtgaaggtgtacctggcgctc
ggcgacatcatcttccacgacctgaaggaccccttcgacgcagcgggctactaccagctc
gcgttggcggcggccgtggacctgggccacaagaaggcccagctgaagatctactcgcgc
ctggccaccatctatcaccacttcctcatggaccgcgagatgtccctcttcttctaccag
aaggccaggaccttcgcctccgagcttaacgcccgcaggaccaacctcgtgccccagagc
ttctgcagcagggccccctggctggcccctggccacctgccctga
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