Marmota marmota marmota (Alpine marmot): 107139187
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Entry
107139187 CDS
T09644
Symbol
Rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03030
DNA replication
mmma03410
Base excision repair
mmma03420
Nucleotide excision repair
mmma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107139187 (Rfc1)
03410 Base excision repair
107139187 (Rfc1)
03420 Nucleotide excision repair
107139187 (Rfc1)
03430 Mismatch repair
107139187 (Rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmma03032
]
107139187 (Rfc1)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107139187 (Rfc1)
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107139187 (Rfc1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107139187 (Rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
Rad17
BRCT_2
AAA_22
AAA_14
AAA_17
AAA_33
AAA_18
AAA_16
AAA_30
AAA_5
nSTAND3
Zeta_toxin
AAA_7
RNA_helicase
NTPase_1
NPHP3_N
AAA_28
TIP49
Motif
Other DBs
NCBI-GeneID:
107139187
NCBI-ProteinID:
XP_015337525
Ensembl:
ENSMMMG00000017905
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSVEETLKGKKGIKEIKVNSSCKEDASKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQSEKLPLSSKPSKILRKDPVTYISETDEDDDFMCKK
AASKSKENGRSTNSYLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKQPSQNTNDSILNDEVIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AQKNTEEGETFSSAQANLSKPEKHKYSHKEQFSNARKSYSPNKPNKCENSKESQQHSKSS
GESSSPKASSKLALMKAKEESSYKETEPVASNRKDSANELKGEKKTPKKTKGSPAKKESV
SPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAK
SLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGKKS
KYEIAVEAEMKKEKSKLERTPQKYNQGKRKSSPTKKESESKRNKLTPKRDSSVKAIKKET
QETNVPRKGLDFKEQVAQDTQGDSKARDLADSGESKVENLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLGNWHKSSPEEKKHAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVC
QELGYSYVELNASDTRSKNSLKALVAESLNNTSIKGFYSSSGGAAPSISMKHALIMDEVD
GMAGSEDRGGVQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGA
MMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKD
IKLGPFDVARKVFAVGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPVAAGGDMKK
HLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWL
GKHSSTGKHDRIVQELALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGIQDVVA
LMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQVIKTS
RPSTSSALDSEYNEELHEDDSQSEEKDQDAIETDAMIKKKTKSPKPSKPEKDKESKKGKG
KSLKK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggagttataccaagtggaaaaaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgttgaagaaactttaaagggaaagaaaggaata
aaggaaatcaaggtaaatagctcttgtaaagaggatgcctccaaacagaagcaaccaaac
aagaaaaagaggattatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaatcagaaaaattgccattgtcttctaaacctagtaaaattttgcgg
aaggatcctgttacatacatttcagaaacagatgaagatgacgactttatgtgtaagaaa
gcagcctctaaatcaaaagaaaatggaagatctacaaatagttatcttggaacatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataagcctttatcaccaataaaactt
acaccaacctcagtgcttgattattttggaactggaagtgtccaaagatcggataagaag
atggtagcaagcaaaagaaaacaaccttcacagaatacaaatgattccatattaaacgat
gaagtcatcgccaagcaattgcaacttgatgaagatgcagagctggagaggcaattgcat
gaagatgaagagttcgccagaacgttagccatgttggatgaggaacccaagaccaaaaag
gcccaaaagaacactgaagagggagaaacgttttcatctgcccaagccaatttaagtaaa
ccagaaaaacataaatattctcataaagaacaattttcaaatgcaagaaagagctatagt
cctaataagccaaataagtgtgaaaactcaaaagaatctcagcaacattccaagtcatca
ggagaatcctcttctccaaaggccagttctaagttggcacttatgaaagcaaaagaagag
agttcctataaagaaacagagcctgtggcctcaaatagaaaagacagtgccaatgagttg
aaaggagagaagaaaactcctaagaaaaccaaaggttctccagctaaaaaagagtctgta
agtccagaagattctgaaaagaaacgaactaattatcaagcttatcgaagctacttaaat
cgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaattgcttg
gaaggccttatatttgtgatcacaggagtgctggagtccattgaacgagatgaagccaag
tctttaattgaacgttatgggggaaaagtaacaggaaatgtcagcaagaaaaccaactac
cttgtcatgggtcgtgatagtggacagtccaagagtgataaggcagcagccttggggaca
aaaattattgatgaagatggactgttgaatttgattcgaactatgccaggcaagaagtct
aaatatgaaatagcagttgaagctgagatgaagaaagaaaaatccaaattggagagaaca
ccccaaaaatataatcaaggaaaaagaaaaagtagtccaaccaagaaggaatcagaatct
aaaaggaacaagctaactcctaaaagggacagttctgtaaaggcaataaaaaaggagaca
caggaaacaaacgtgcctcggaaaggcctggactttaaggagcaggtggcccaggacaca
cagggtgacagtaaggctagggatttggctgacagcggtgaaagcaaagtggaaaatttg
ctctgggtagataaatacaagccaacttcactcaagactataattggacaacaaggtgac
cagagttgtgccaataaactgctacgctggctcggaaactggcacaagagttctcctgaa
gagaagaaacatgcaaagtttggtaaatttgccggtaaagacgatggctctagttttaaa
gcagcattgctctcgggccctcctggtgttggcaaaaccaccacagcttctctggtgtgt
caggaattgggatatagctacgtggaactaaatgcaagtgacactcggagtaagaacagt
ttgaaggcacttgttgctgaatcactgaataacaccagcatcaaaggcttttattcaagc
tctggtggagcagccccttccataagcatgaaacacgcgctcatcatggatgaagtagac
ggcatggcaggcagtgaagaccggggcggagtgcaggaattaattggcctgataaaacat
actaaaatacccattatttgtatgtgtaatgatagaaatcatcccaagattcgctctttg
gttcattattgttttgatcttcgttttcaaagacctcgggttgaacagataaagggtgct
atgatgtccattgcatttaaagagggtttaaagattccccctcctgctatgaatgaaata
attttaggagccaatcaagatatcagacaggttttgcacaatctgagtatgtggtgtgca
cgaagcaaggcgctaacctacgaccaggccaaggccgactctcatagggccaagaaggat
atcaaactgggcccatttgatgttgcccggaaagtgtttgcagttggagaggagactgct
catatgtcacttatggacaaatcagatctcttttttcatgactattcaatagcacccctc
tttgtccaggagaactatgtgcatgtgaagcctgtagctgcagggggtgacatgaaaaag
cacttgatgcttttgagccgagcagcagacagcatttgtgatggggacttagtggacagt
cagattcggagtaagcaaaactggagtcttctgcccacacaggccatttatgccagtgtt
cttcctggagagttgatgagggggtacatgacccagtttcccacctttccgagctggctg
ggcaagcactcatccaccggcaaacatgatcgtattgttcaggaactagcattgcatatg
agtctcagaacttactctagcaaaaggactgtgaacatggattatctgtcacacataaga
gatgcacttgtacaacccttgacttcacaaggggtggaaggaatacaggatgttgttgca
cttatggacacatattatctgatgaaagaagactttgagaatatcatggaaattagcagc
tggggtggcaaacctagtcccttttccaagctggaccccaaggtgaaagcagctttcaca
agagcttacaataaggaagcccacctcaccccatattcacttcaggtaataaagacatct
agacccagcacgagctcagcactagattctgaatacaatgaagaattacatgaagatgac
tctcagtctgaggagaaagaccaagatgctatagagactgacgctatgatcaagaaaaag
acaaaatctccaaagccttcaaaaccagaaaaagataaggagtccaaaaaaggaaaagga
aaaagtttgaagaaatga
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integrated database retrieval system
