Marmota marmota marmota (Alpine marmot): 107139234
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Entry
107139234 CDS
T09644
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107139234 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107139234 (Fip1l1)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107139234 (Fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107139234
NCBI-ProteinID:
XP_015337591
Ensembl:
ENSMMMG00000020140
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFSLFKVQQGR
TGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLTGSAPSWPSLVDTTKQWDYYARREKDRDRERDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcggcaccggaggggat
gaggaggaagagtggctgtatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagacgaaaatgaagttgaaaggccagaagaagaaaatgccagcgctaatcct
ccatcaggaatagaagatgaaactgctgaaaatggcgtaccaaaaccgaaagtgactgag
acagaagatgatagtgatagtgacagtgatgatgacgaggatgatgttcatgtcactata
ggagatattaaaacaggagcgccacagtatgggagttatggtacggcacctgtaaatctt
aatatcaagacagggggaagagtttatggaactacaggaacaaaggtcaaaggagtagat
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattccttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattactttaattatgggttc
aatgaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacttctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcagtctttttaaggtacagcagggcaga
actggaaattcagagaaagaaacagcacttccatctacaaaagccgagtttacttctcct
ccatctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattcaagcgttgggaagtggcaggatcgatatggg
agggccgaatcacctgatctaaggagattacctggagcaattgatgttattggtcagact
ataactattagccgagtagagggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccgtttttc
cctccaggagctcctcccacccaccttccaccacctccatttcttccaccacctccaact
gtcagcactgctccacctttgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggtgctcctcctccatctcttataccaacaatagaaagcgga
cattcctctggttatgatagccgttctgcacgtgcatttccatatggcaatgttgccttt
ccccatcttactggttctgctccttcatggcctagtcttgtggacaccaccaagcaatgg
gactattatgcaagaagagaaaaagaccgagatagagaaagagacagagacagagagcga
gatcgtgatagggacagagaacgagaacgcaccagagagagagagagggagcgtgatcac
agtcctaccccaagtgttttcaacagtgatgaagagcgatacagatacagggaatatgca
gaaagaggctacgagcgtcacagggcaagtcgagagaaagaagaacgacatagagaaaga
cgacacagagagaaagaggaaaccagacacaagtcatctcgcagtaatagtagacgtcgc
cacgaaagtgaagaaggagacagtcacaggagacacaagcacaaaaagtctaaaagaagc
aaagaaggaaaagaagctggcagtgagcctgcccccgaacaggagagcactgaagctgca
cctgcggagtag
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