Marmota marmota marmota (Alpine marmot): 107139294
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Entry
107139294 CDS
T09644
Symbol
Rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107139294 (Rnf180)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107139294 (Rnf180)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107139294 (Rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
107139294
NCBI-ProteinID:
XP_048662065
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MHGWNLTHRKMKKSEELITKNHNQEEISILRCWKCRKCIANSDCFMNYLENQVIKDRHDS
VDAESICHVWHMNIEALPEWINCLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQL
AAVHLSKSRTDYQPTEAGRLMRPSLKYLSHPRVQSGCDKETLLTGGGSKSRNYRLLNMAQ
NNNGLGRLTEALCLEVRSTYFEMKNEKLLFKTSDPKYQLFVPQLMSGRCTARAFHRKSHS
LDLNINEKLTLLPTLYEIHSKTTAYPRLNETRPVSLAGLPLQSSKNSCSFQNPSSFDPDM
LLQRFSVAPRETQTQRGGEFQCGLEASSVYSDHTNTNNLSFLMDLPSAGRSMLEASDQEE
HLSALDFLRSASFSLGTINQRLNKRERSKLRNLRRKQRRHERWLQKQGKFSGVGLLDHMT
LNNEMSTDDDNEYAEEKDSYICAVCLDVYFNPYMCYPCHHIFCEPCLRTLAKDNPANTPC
PLCRTIISRVFFQTELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKAFHLFGGFHR
RAAPVTRRQFPHGAHRMDYLHFEDDSRGWWFDMDMVIIYIYSVNWVIGFIVFCFLCYFFF
PF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggtggaaccttacgcacaggaagatgaaaaaaagtgaagaattaataactaaa
aatcataatcaagaagaaataagtattcttcgttgttggaaatgtagaaaatgtatagca
aattctgattgcttcatgaattatcttgaaaatcaagtgattaaggatagacatgattca
gttgatgctgaaagtatttgccatgtgtggcacatgaatatagaagctcttccagagtgg
ataaattgcctaatacaaaaagcccagtggacagttggaaaactgaattgccctttctgt
ggggcccgtttagggggctttaattttgtcagcactccaaaatgttcctgtggccagctt
gcagctgtacatctctccaagagccggactgattatcaaccaacagaggcaggcagacta
atgagaccatcgctgaaatacttgtcacatcctagagttcagtcaggttgtgacaaggaa
actctgctgacaggtggtggctccaaaagcagaaattacaggcttttaaacatggcccaa
aataataatggccttggaagattaacagaagcactgtgcctggaggtgcgatcgacatat
tttgagatgaagaatgaaaaattgctcttcaaaacatcagatccaaaataccagcttttt
gttccccagcttatgtctggcaggtgcacggcaagagcttttcatagaaaatcacatagt
ttggatctgaacatcaatgagaaactgactttattacccactttatatgaaatacatagt
aagacgactgcctatcccaggctaaatgaaacacggcctgtttcccttgcaggcttgcct
ttacagtccagtaaaaatagctgttcctttcagaatccatccagttttgatcctgatatg
ctgctgcaaagattttcagtggctccccgtgagacccagacacaaagaggaggagaattt
cagtgtggtctagaagcttcttcagtgtattctgaccacactaatactaacaacctgtct
ttcctgatggacctgccctcagccggcaggagcatgctggaggcctcagaccaagaggag
cacctttctgctctggacttcttgcgctcagccagtttttcattgggcaccattaatcag
aggctgaataagagagaaaggagcaagttgaggaatctaagaaggaaacaacgaaggcat
gaaagatggctacagaagcagggtaaattctcaggagtgggattgctggatcatatgact
ttgaataatgagatgagtacagatgatgataatgaatatgcagaagaaaaggacagctac
atctgtgcagtgtgtctggatgtttacttcaacccttacatgtgttacccttgccaccac
atcttctgtgagccctgtttacggactctagccaaagacaatcctgcaaacactccctgc
ccattgtgtcggacaattatttcaagagtgtttttccagacagaactgaacaatgccaca
aaaacattctttactaaagaatatttgaaaattaaacaaagctttcagaagtccagctct
gcaaaatggcctctaccaagctgcagaaaagcttttcatctttttggaggtttccacaga
cgggcagctccagttacaagaaggcagttcccacatggtgcacacaggatggattacctg
cactttgaggatgacagccgtggatggtggtttgatatggatatggtgatcatctatatt
tattcagtgaactgggtcattggattcattgttttctgctttctttgctattttttcttt
ccgttttag
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integrated database retrieval system
