Marmota marmota marmota (Alpine marmot): 107139446
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Entry
107139446 CDS
T09644
Symbol
Trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107139446 (Trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
mmma04031
]
107139446 (Trim23)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107139446 (Trim23)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107139446 (Trim23)
GTP-binding proteins [BR:
mmma04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
107139446 (Trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
Gtr1_RagA
MMR_HSR1
GTP_EFTU
FemAB
Motif
Other DBs
NCBI-GeneID:
107139446
NCBI-ProteinID:
XP_015337790
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MCSQHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHC
IRTFTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLH
ETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLA
KQEIKRLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGAG
KTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVV
FVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLC
CGRSWFIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctcaacaccaggtgcatgccattgagtttgtttgcttggaagaaggttgtcaa
actagcccccttatgtgttgtgtctgcaaagaatatggaaaacaccaaggtcataagcat
tcagtattggaaccagaagctaaccagatccgagcatcaattttagatatggctcactgc
atacggaccttcactgaagaaatctcagattattccagaaaattagttggaattgttcag
cacattgaaggcggtgaacaaatagtggaagatggaattggaatggctcacacagaacat
gtaccaggtactgcagagaatgcccgatcatgtgtccgagcttatttttctgatctacat
gaaactctgtgtcgtcaagaagaaatggctctaagtgtggtcgatgctcatgttcgtgaa
aaactgatatggctcaggcagcaacaagaagatatgactattctcttgtcccaggtttca
actgcctgtctccattgtgaaaagactttacagcaggatgattgtagagttgtcttggca
aaacaggaaattaaaaggttattagaaaccttgcagaaacagcagcagcaatttacagag
gttgcagatcatattcagttggatgccagcattcctgtcacttttacaaaggacaataga
gttcacattggaccgaaaatggaaattcgagttgtcacattaggattagatggtgctgga
aaaactactattttgtttaagttaaaacaggatgagttcatgcagcccattccaacaatt
ggatttaatgtggaaactgtagaatataaaaatttaaaattcactatttgggatgtaggt
ggaaaacacaagttaagaccattgtggaaacactattacctcaatactcaagctgttgta
ttcgttgttgatagcagtcatcgagacagaattagtgaagcacacagtgaacttgcaaag
ttgttaacagaaaaagaactccgggatgctttgctcctgatttttgctaataaacaggat
gttgctggagctctgtcagtagaagaaatcactgaacttctcagtctccataaactatgc
tgtggtcgtagttggtttattcagggctgtgatgctcgaagtggtatggggctgtatgaa
gggttggactggctttcaaggcaacttgtagctgctggagtattggatgttgcttga
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