Marmota marmota marmota (Alpine marmot): 107139560
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Entry
107139560 CDS
T09644
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107139560 (Dsc1)
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Major cadherins
107139560 (Dsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_2
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
107139560
NCBI-ProteinID:
XP_015337946
Ensembl:
ENSMMMG00000008573
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MAVASAAPGSIFCKQLLFSLLVLILFCDACQKISLQVPSHLQAETLVGKVNLEECLKSSS
QMLSSDPAFRILEDGSIYTTHDLLLSSEGKTFSILLSDSQRQEQKEIEIVLLAREEKASK
KRHTKDRVLKRSKRRWAPIPCSLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIYCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFKVEDDNDNAP
YFETKMTVFSVPENCRSGTSVGQVTAIDNDEPGTLHTRLKFKILQQIPDHPKHFSIHPDT
GVITTTTPLLDREKCDTYKLVMEVRDMGGQPFGLFNTGTITISLEDENDNPPYFTETSYF
TEVEENRIDVVILRMKVHDLDLANTPHSKAVYTILQGNENGNFKISTDPNTNEGILCVVK
PLNYELNRQVVLQIGVLNEAEFTKAANSQTPPSMCTTTVTVKIKDSDEGPECEPPVKIIQ
SKDGLPAGKELLGYKALDPETRSGEGLRYQKLGDEDNWFEINEHTGDLRTVKVLDRESKF
VKNNQYNVSVVARDAVGRSCTGTLVVLLEDFNDHPPKIEKDVTICKHDKDYALLEPEDDD
GPDNGPPFQFFLDNSTNKLWTIESKNGKQGILRAKQNLDYNYYSVPIQIQDRHGLSAKHV
LSVRICDCTTPSDCRMAIKDERDIKPGNVILGKWAILAMVLGSALLLCIMFTCFCVTTKR
TVKKCFPEDVAQQNLIVSNTEGPGEEVTEANIRIPTQTSNICDTSMSVGTLGGQGIKTQQ
SFEMVKGGYTLDSNKGHHTLESSKGVGQGGVDTGRYAYTDWQSFTQPRLGEKVYLCGQDE
EHKHSEDYVRSYNYEGKGSMAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVQK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcatcttctgtaagcagctccttttctctctt
ctggttctgatattattttgtgatgcttgtcagaaaatttctcttcaagttccttctcat
cttcaggccgaaacacttgtaggcaaagtgaatctggaggagtgtctcaagtcgtctagc
caaatgctgtccagcgaccctgcctttagaattctggaagatggctccatctacacaaca
catgacctccttttgtcttctgaagggaagacgttttccattttactctccgacagtcag
aggcaggaacaaaaggagatagaaatcgtactgttggcaagagaagaaaaggcatctaag
aaaagacataccaaagacagagttctcaagcgcagtaagagaagatgggctcctattcct
tgttcgctgatggagaactcattaggtccatttccccaacatgttcagcagatccaatct
gatgctgcccagaattacaccatcttttactccataagtggaccaggagtggacaaagag
cccttcaatttattctacatagagaaagacactggggatatctattgtactcggagcatt
gaccgtgagcagtatgatcagtttttggtatatggctatgcaacaactgcagatggctat
gcaccagattatccgctccccttgttattcaaagttgaagatgataatgataatgcccca
tattttgaaaccaaaatgacagtttttagcgtgcctgaaaattgccgatctggaacttca
gtgggacaagtgactgccatagacaatgatgaacctggaacccttcatactcgtctgaaa
ttcaaaattctacaacaaatccctgatcatccaaagcatttctccatacatccagataca
ggtgtcatcactacaactacacctctgctggatagagagaaatgtgatacttacaagtta
gtaatggaagtgcgagacatgggaggtcaaccttttggcttatttaatacaggaacaatt
actatttccctggaggatgaaaatgacaatccaccatatttcacggaaacttcttatttt
acagaagtagaagaaaatagaatcgacgtggtgattttacggatgaaagtacatgaccta
gatttggccaatacgcctcactcaaaggctgtgtacacaatcctacagggaaacgagaat
ggaaacttcaaaattagcacagatccaaatacaaatgaaggaatcttgtgtgtggtcaag
ccattgaactatgaactcaatcgccaagttgttttgcaaatcggtgtacttaatgaagca
gaattcactaaagcggcaaactcgcaaactcctccctcaatgtgtactacaactgtgact
gttaaaatcaaagacagtgatgagggccctgaatgcgagccaccagtgaaaattattcag
agtaaagatggccttccagctggtaaggaactccttggatacaaagcactggacccagaa
acacgcagtggtgaaggcttaaggtatcagaagttgggagatgaagataactggtttgaa
atcaatgaacacactggagatttgaggactgtaaaagtactagatagagaatcgaaattt
gtaaaaaacaaccagtacaatgtttcagtggtggcaagagatgcagttggccgatcttgc
actggaacactcgtagttcttttggaagattttaatgatcatccaccaaaaattgaaaaa
gatgtgacaatttgtaagcatgataaagattatgctcttctggaacctgaagatgacgat
gggcctgataatggtccaccttttcaattctttctggataattctaccaacaaactttgg
actatagaatcaaagaatggtaaacaaggtattcttcgtgcaaagcaaaatcttgattac
aactattattctgtgcctatccaaatacaagacagacatggtttgtctgcaaaacatgtg
ttgtcagtgagaatatgtgactgcacaactccatctgactgtagaatggctattaaagat
gagagagatattaaaccaggaaatgttatacttggaaaatgggctattcttgccatggtg
ttgggttctgcattattattgtgtattatgtttacatgtttctgtgttactaccaagagg
acagtaaagaaatgttttccagaagatgtagcacagcaaaatttaattgtatccaatact
gaaggacctggagaagaagtgacggaagcgaatattaggatccccacacagacatccaac
atttgtgacacaagcatgtcggttggtactcttggtggccagggaatcaaaacgcagcaa
agttttgagatggtcaaaggaggctacactttggattccaacaaaggccatcacaccttg
gagtccagcaagggagtagggcagggaggtgtagacaccggcagatatgcgtacacggac
tggcagagtttcacccaacctcggcttggtgaaaaggtgtacttgtgcggacaagatgag
gaacacaaacattctgaagattacgttcgttcttacaattatgaaggcaaaggctctatg
gccggctcagtagggtgctgcagcgatcggcaggaagaagaagggctggagtttctagat
cacctggaacccaaatttaggacattggcaaagacatgtgtacagaaataa
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