Marmota marmota marmota (Alpine marmot): 107139580
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Entry
107139580 CDS
T09644
Symbol
Npc1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X2
KO
K12385
Niemann-Pick C1 protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
mmma04142
Lysosome
mmma04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
107139580 (Npc1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107139580 (Npc1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
107139580 (Npc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmma02000
]
107139580 (Npc1)
Transporters [BR:
mmma02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
107139580 (Npc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
107139580
NCBI-ProteinID:
XP_015337969
Ensembl:
ENSMMMG00000009738
UniProt:
A0A8C5Z7Y8
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MSARGPALCFFLLLLCPVQVFLQSCVWYGECGIASGDKRYNCRYSGPPKPLPKDGYDLVQ
ELCPGFFFDNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTETEDYVDPITNQTKTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGRD
ADACNATNWIEYMFDKNNGQAPFTITPIFSDLPVQGMEPMNNATKGCNESVDEVTGPCSC
QDCSIVCGPKPQPPAPPIPWRIFGLDAMYVIMWITYMAFLFVFFGAFFALWCYRKRYFVS
EYTPIDSNIAFSVNASDKGEASCCDRLGAAFEGCLRRFFTQWGSYCVRNPGCIIFFSLVF
IAACSSGLAFVRVTTNPVDLWSSASSQARQDKEYFDTHFGPFFRTEQLIIRAPNTSKHIY
QPYPAGADVPFGSPLDKEILHQVLDLQTALESITANYNNETVTLQDICLAPLSPYNKNCT
ILSVLNYFQNSHSALDHQVGDDFFVYADYHTHFLYCTRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYKNPNLT
ISFTTERSIEDELNRESKGDIFTVVISYAIMFLYISLALGHIKNCRRLLVDSKISLGITG
IVIVLSSVACSLGIFSYMGTPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDEHLQGETL
DQQLGRVLGEVAPSMFLSSFCETSAFFFGALSVMPAVHTFSLFAGLAVFIDFLLQITCFV
SLLGLDIQRQEKNRLDILCCVKGAEDGSSVQASESCLFRFFKNSYSPLLLKDWMRPIVIA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVIDYFKSLGQYLHAGPPVYFVLEEGHNYT
SLQGQNMVCGGMGCDNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVY
NITDQFCNASVVDPSCVRCRPLTPEGKQRPQGGDFMKFLPMFLSDNPNPKCGKGGHAAYS
SAVNILGNNTGIGATYFMTYHTVLQTSADFIDAMKKARLVASNITETMSTKGSNYRVFPY
SVFYVFYEQYLTIIDDTIFNLGVSLGSIFLVTVIVLGCELWSAVIMCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSAKGSRVDRAEEALALMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSR
TTQERYKGTERERLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcggtccagccctgtgcttcttcctgctgctgctctgtcctgtgcaggtg
tttttacagtcctgtgtttggtatggagagtgtggaattgcatctggagataagagatac
aattgcagatattctgggccaccaaaaccactgccaaaagatgggtatgacttagtgcag
gaactctgtcctggattcttcttcgacaatgtcagtctctgttgtgatgttcagcagctt
cggactctgaaagacaacctgcagctgcctctgcagtttctgtccagatgcccatcctgt
ttttataacctaatgaacctgttttgtgagctgacatgtagccctcgtcagagtcagttt
ctgaatgttacagaaactgaagactatgttgatcctattacaaaccagacaaaaacgaat
gtcaaagaattacaatactatgtcggacagagttttgccaatgcaatgtacaatgcctgc
cgggatgtggaagccccctcaagtaatgacaaagccctgggactcctctgtgggagggat
gctgatgcctgcaatgccaccaactggatcgagtacatgttcgataagaacaatggacag
gcgccatttaccatcactcccattttttcagatcttccagtccaggggatggagcccatg
aacaatgccaccaaaggctgtaatgagtctgtagatgaggtcactgggccatgcagctgc
caggactgctccatcgtttgtggccccaagccccagcccccagcacctcctattccctgg
aggatctttggtttggatgccatgtatgtcatcatgtggatcacctacatggcatttttg
tttgtgttttttggagcattttttgcattgtggtgctacagaaagcgttattttgtctcc
gaatacactcccattgacagcaatatagccttttctgttaatgccagtgacaaaggggag
gcgtcctgctgcgaccggcttggtgccgccttcgagggctgtttgaggcgcttcttcacc
cagtggggatcttactgtgtccgaaaccctggctgcatcattttcttctcactggtcttc
atcgccgcatgttcttcaggcctggcatttgtgcgggtcaccaccaatccagttgacctc
tggtcatctgccagcagccaggcccgccaggataaagaatactttgacacacactttggg
cctttcttccggacagagcagctcatcatccgggcccccaataccagcaaacacatttac
cagccataccccgcaggagccgacgtgccctttggatccccacttgacaaagagattttg
caccaggttcttgacttacaaacagcccttgaaagtattactgcaaattataacaacgag
actgtgacacttcaagacatctgcttggcccctctctcaccttataacaagaattgcacc
attttgagtgtgttaaattacttccagaacagccattctgcactggaccatcaagtaggg
gatgacttctttgtgtatgctgattatcacacgcactttctgtactgcacacgggctcct
gcctctctgaatgatacaagtctgctgcatgatccttgcctcggtacattcggtggaccc
gtgttcccgtggcttgtgctgggaggctacgatgatcaaaactacaataatgccactgct
ctcgtgattaccttccctgtcaataattactacaatgatacagagaagctccagagggcc
caggcctgggaaaaagagtttattaattttgtgaaaaactacaagaatccaaatctgacc
atttctttcactaccgaacgaagtattgaagatgaactaaatcgtgaaagtaaaggggat
atcttcactgttgtcattagctacgccatcatgtttctgtatatttccctagccttgggg
cacatcaaaaactgtcgcaggcttctggtggattctaaaatctccctaggcatcacaggg
atcgtgatcgtgttgagctcggtggcctgctcattgggtatcttcagctacatggggacc
ccattgaccctcatagtgattgaagtcatcccattcctggtgctggctgtgggggtggac
aacatcttcatcctggtgcagacctaccagagagatgaacatcttcaaggggaaaccctg
gatcaacaactgggcagggtcctaggagaagtggctcctagtatgttcctgtcatccttt
tgcgagacttcagcgtttttctttggagccctgtcggtgatgccagccgtccacactttc
tctctgtttgcgggattggctgtcttcattgacttcctacttcagattacctgtttcgtg
agtctcttgggattagacattcaacgtcaagagaaaaatcggctggacatcctctgctgt
gtgaaaggtgctgaagatggaagcagtgtccaggcctcagaaagctgcctgtttcgcttc
ttcaaaaactcctactctccacttctgctgaaggactggatgcgacccattgtgattgcc
gtctttgtgggtgtcctgtcatttagtattgcggtcctgaacaaagtagaaattggattg
gatcagtccctttcaatgccagatgactcttacgtcatagattacttcaaatcccttggt
cagtacctgcacgcgggtccgcctgtgtactttgtcctggaggaagggcacaactataca
tccctacagggacagaacatggtgtgcggcggcatgggctgtgacaacgattccttggtg
cagcagatatttaacgcagctcaactggacaactacacccggataggctttgctccctcg
tcctggattgacgattattttgattgggttaagccacagtcttcttgctgtagagtctac
aatatcactgaccagttctgcaatgcttcagtggttgacccttcctgcgtccgctgcagg
cctctgactccggagggcaaacagagacctcagggtggagacttcatgaaattcctgccc
atgtttctctctgataaccctaaccccaagtgtggcaaagggggacatgcagcttacagt
tcagcagttaacatccttggcaataatactggcatcggagccacatacttcatgacctac
cacaccgtgctgcagacctccgctgactttattgatgctatgaagaaagcccgacttgtg
gccagtaacatcaccgaaaccatgagcacgaagggcagtaattaccgggtgttcccatac
agtgtgttctacgtcttctacgaacagtacctgaccatcattgatgacaccatctttaac
cttggtgtgtccctggggtccatatttctggtgaccgtgattgttctgggctgtgaacta
tggtctgcagtcatcatgtgcgtcaccatcgccatgatcctggtcaacatgtttggcgta
atgtggctgtggggcatcagtctgaacgcagtgtccttagtcaacctggtgatgagctgt
ggcatttccgtggagttctgcagccacataacaagagcattcacagtgagtgcaaaagga
agccgcgtggaccgtgcagaagaggcgcttgctctcatgggcagttctgtattcagcgga
atcacacttacaaaatttggaggaattgtggtgttggcctttgccaaatcccagattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatggacta
atatttctccctgtcttacttagttatataggcccatcagtaaataaagccaaaagtcgc
accacccaagaacgatacaaaggcacagagcgagaacgactcctaaatttctag
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integrated database retrieval system
