Marmota marmota marmota (Alpine marmot): 107140254
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Entry
107140254 CDS
T09644
Symbol
Ptchd3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
107140254 (Ptchd3)
Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
Other domain-containing proteins
Patched domain-containing proteins
107140254 (Ptchd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
107140254
NCBI-ProteinID:
XP_015338784
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MSLSSSKVAPRTEIETQVGPEPEEPVNPEHPPEPAKEGQSEGKFTERSEIGVGPDSPELP
RPQRPLLDASKLLAHEGRESQRNWASGQSAERLPPLRQESKQLQPQPPPPQQPSSPPPPP
PPPPPPPQQPQQPQQPPQDPLRTPQREPSRITQETETVHRTRCHTNCLEKPLSRAFQRLG
WCVGSHPWVFLLVPILLTAALGIGFIYLPKEEEENLEEQYTPIGSPAKAERRFVQAHFTT
NDSYRFSSTRSSSETNFASILVVSNTETLLESEIFEEVSKLDQAVQTLSVRKENGAPIHY
REVCAKYRTFCVPSNPLLYVWQRNKSLDLKTFTFPMHNFKNHFIYLAGFFGGNTLGDAVG
QNHLLLETKAMRLLYYLKTEVKEDSEQSKEWLVHFLDEFYNLKEKLAFKNIQIILVIWGS
LQFHRNLRTVFSISQEKRNFDRNCVERFDCVRNKMWVAIFGVVSAAFAVVSGFGLMLYIG
VPFVIIVANSPFLILGVGVDDMFIMISAWQKTSLMDSIKERMASVYGKVAVSITITTITN
VLAFYTGIMSSFRSVQYFCIYTGTTLLFCYFYNITCFGAFMALDGKREILCLRWLKKPDQ
KYSSLKKACCLPFSSVPDEQGTDIHPMNLFFRDYFGPILTRTMSKFFVVVIYILYIISSI
YGCFQVQEGLHLRNLASDDSYITPYFNVEEDYFSDYGPRVMIIITESINYWDEDVREKLE
KCIENFKENDYVDRNLTEFWLHTYMDYMKRNGQEPNDKDTFMNSMSQFLRKFPVFTYDIN
ITSNEIISSRAFIQTVGVSSSTNKKIMLLQLRETAEKCEIPLMVYNQAFIYFDQYAAIIE
NTVRNIMVASTAMFIVSLLLIPHPMCSLWVTFAIASVIVGVTGFMAFWNVNLDSISMINL
VICIGFSFDFSAHISYAFVSSTKTSVNQKSIEALYLLGYPVLQSAISTIIGVCVLATAKA
YIFRTFFKIMFLVMVFGAAHGLIFIPVFLTFF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttagttcctctaaggttgcgccacggacagaaattgagactcaggtggggccc
gagccagaggagccggtcaacccagagcacccaccggagcctgcgaaggaggggcagtcg
gagggcaagttcaccgagcggtcggagatcggggttggacccgactccccggagttgccc
aggccccagcggccgctgctcgacgcctcgaagctgctggcccatgaaggtcgggagtca
cagcggaactgggcttcagggcagagcgcagagcggctaccgcccttgaggcaggaatcc
aagcagctccagccccagccgccgccgccccagcagccgtcgtcgccgccaccgccacca
ccgccgccgccaccgccaccgcagcagccccagcagccgcagcagccgccccaggatcca
ttgaggacccctcagcgagagccatcgaggataactcaagagactgagacagtccacaga
actcgttgccacaccaactgcctggagaagccgctctcccgcgccttccaacggctggga
tggtgtgtgggttcacacccctgggtcttcctgctggtccccatcctgctgacggctgcg
cttggcatcggcttcatttacctgcccaaggaggaggaagaaaacctcgaggagcagtac
actccgatcgggagccctgccaaggccgagcggcgatttgtgcaggcacatttcaccacc
aatgactcatatcgcttctcctctaccaggagcagcagcgagaccaacttcgcttccatt
ctggtggtctccaacaccgaaacactgctggaatcagagatctttgaggaagttagtaaa
ttagaccaagcagtgcagactctgagtgtgagaaaggaaaatggagccccgatccactac
agagaggtgtgtgccaagtacaggaccttctgtgtgccctccaacccactcctgtacgtc
tggcagaggaacaaatccctcgacctgaaaacattcaccttccccatgcataactttaag
aaccacttcatctacctggctggcttctttggtggaaataccttgggcgatgccgtagga
cagaaccacttacttctggaaaccaaagccatgaggctcttgtactatctgaagaccgaa
gtcaaggaggacagtgagcagagcaaggagtggctggttcattttctggacgaattttac
aaccttaaggagaagctggcctttaaaaatatccagattattttggtcatctggggctcc
ttgcaattccataggaatttgagaactgttttctccatttctcaggagaaaaggaatttt
gataggaattgtgttgaaaggtttgactgtgtacgaaacaaaatgtgggttgcaatcttt
ggagtggtgtctgctgcctttgcagtggtgagcggctttggcctgatgttgtacattggg
gtgccatttgtgatcatagttgcaaattcaccatttcttattctaggtgttggggttgat
gatatgtttatcatgatttctgcctggcagaagaccagtcttatggatagcataaaagag
cggatggccagtgtctatggaaaggtggcagtgtccattacaatcaccaccatcaccaat
gtcctggccttctatacagggattatgagttctttcaggtccgtacaatacttttgcatc
tatacaggaacaaccctgctcttttgttatttttataacatcacctgttttggagcattt
atggccctggatggtaaaagagaaatactctgcctacgctggttgaaaaagccagatcag
aaatattcctcattaaaaaaggcctgctgtctcccattttcttctgtcccagatgaacaa
ggaactgatatccacccaatgaatttgttctttagagactattttggtcctatactcaca
agaaccatgtccaagttttttgtggtggtgatatacattttgtacatcataagcagcata
tatgggtgtttccaagtgcaggaaggtttacacctccgaaatctagcaagtgatgattcc
tacattacaccatattttaatgtagaggaagattatttttcggattatggtcccagggtt
atgattattattactgaaagtattaactactgggatgaagatgtaagggaaaaattggaa
aaatgtatagaaaattttaaagaaaatgactatgtagatagaaatcttacagagttttgg
ttacacacatatatggattatatgaaaagaaatggacaggagcctaatgataaggatact
tttatgaatagtatgtctcaatttttacgtaaatttccagtttttacatatgatattaat
attacatcaaatgaaatcatttcctcccgggccttcattcagactgtgggtgtttcttcc
tcaaccaataagaaaataatgttactccaattacgagaaacagccgaaaagtgtgagatt
cctctaatggtgtataaccaggcattcatatattttgatcagtatgctgcaatcatagaa
aacactgtgcggaatatcatggttgcgtcgacagctatgttcattgtttctttattgtta
attcctcatccaatgtgttccttgtgggtaacttttgctattgcttctgtgattgtgggc
gtaacaggtttcatggcattttggaatgtcaatcttgattccatatccatgattaatctt
gtcatttgtataggattttcttttgatttttctgcacacatatcttatgcatttgtttcc
agtactaagacttcagtaaaccaaaaatcaattgaggcattatatctgctaggctatcca
gtgttacaaagtgcaatttcaacaataataggagtgtgtgttttagctacagctaaagca
tacatcttcaggacatttttcaagattatgtttcttgttatggtatttggggctgctcat
ggcctaatttttattccagtcttcttaacctttttttga
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