Marmota marmota marmota (Alpine marmot): 107140898
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Entry
107140898 CDS
T09644
Symbol
Col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04820
Cytoskeleton in muscle cells
mmma04926
Relaxin signaling pathway
mmma04933
AGE-RAGE signaling pathway in diabetic complications
mmma04974
Protein digestion and absorption
mmma05146
Amoebiasis
mmma05165
Human papillomavirus infection
mmma05200
Pathways in cancer
mmma05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107140898 (Col4a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107140898 (Col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107140898 (Col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107140898 (Col4a2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107140898 (Col4a2)
09154 Digestive system
04974 Protein digestion and absorption
107140898 (Col4a2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107140898 (Col4a2)
09162 Cancer: specific types
05222 Small cell lung cancer
107140898 (Col4a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107140898 (Col4a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
107140898 (Col4a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107140898 (Col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107140898 (Col4a2)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107140898 (Col4a2)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107140898 (Col4a2)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107140898 (Col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107140898
NCBI-ProteinID:
XP_015339564
Ensembl:
ENSMMMG00000020085
UniProt:
A0A8C6EXS4
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MGQERCAAAGPALRRWLLLGALAVGFLAQSVLAGVKKYDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGTAGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTRGDTGPQGPSGPAGFPGSPGPQGPKGQKGEPYALSKEDRD
KYRGAPGEPGLVGFQGPPGRPGPMGPMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGQKG
EKGDVGLPGPNGIPSDTLHPIVGPTRTTIHPDQYKGEKGSRGEPGIEGISVKGEEGIVGF
SGPRGPSGFDGEKGSPGQKGSRGLDGYQGTDGPRGPKGEAGDQGPPGPPAYSPHPSLAKG
ARGDPGFPGPHGEPGSRGEPGDPGPTGPPGLSFGDEDEKRGLPGEMGPKGFQGEPGIPAF
YPGPPGADGKPGLPGAPGPAGPPGPDGYLFGLKGAEGRVGYPGPSGFPGARGQKGWKGDA
GDCKCAESDQFIRGLPGLPGPKGFSGINGEPGKKGDQGDPGQHGIPGFPGFKGVSGIAGV
PGPKGIKGDSRTITTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIQGPP
GDAGHPGIPGTKGVPGEMGPPGLGLPGPKGEHGFPGDAGLPGPPGFPGPPGPPGTPGQPD
CDTDVKRPIGGDRQETLQPGCVRGPKGLPGRPGPPGPPGTKGLRGIPGFLGADGTPGLKG
FPGDPGREGFPGPPGFMGPRGSKGAVGLPGPDGLPGPVGLPGPAGPPGERGLPGEVLGAQ
PGPRGDAGLPGHPGLKGLPGERGPPGFRGSQGMPGMPGLKGQLGFPGPSGQPGRPGPPGQ
HGFPGAPGPEGPLGRPGAPGLGGLPGDRGDPGDTGVPGPVGMKGLSGDRGDAGFSGERGH
PGTPGFKGMAGMPGIPGQKGERGSPGMHGFQGMVGLKGRSGFPGTKGEAGFFGVPGLKGL
AGEPGVKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGIPGLA
GIPGLPGRPGHIKGAKGDIGVPGVPGLPGFPGVTGPPGITGFPGFTGSRGDKGAPGRAGF
YGEIGPTGDFGDIGDTIDLPGSPGLKGERGIAGTPGLKGFFGEKGAEGEVGFPGIAGMTG
TQGPPGPKGQTGFPGLTGLRGPQGDPGRIGVTGDKGDSGWPGVPGLPGFPGIRGISGLHG
LPGTKGFPGSPGADIHGEPGFPGPTGDRGDPGEANTLPGPTGVPGRKGEQGAPGERGPAG
SPGLQGFPGITPPSNISGSPGDKGAPGIFGLEGYRGPPGPPGPAAFPGSKGDDGNPGASG
VPGNKGWVGDPGPQGRPGVFGLPGEKGPRGEPGFMGNTGATGTVGDRGPKGPKGDQGFPG
APGSLGSPGIAGVPLTISVQPGTMGPQGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQ
GRGGVSAIPGFRGDQGPMGHQGPVGQEGEPGRPGIPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYYASR
NDKSYWLSTTAPLPMMPVAEDDIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLTTIP
EQSFQGTPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgggccaagagcggtgcgcggcggctggccctgccttgcggcggtggctgctgctgggg
gccttggcagtggggttcctggcccagagcgtcttggcgggtgtgaagaagtacgatgtg
ccctgcggagggagagactgcagcggcggctgccagtgctacccggagaaaggaggacgc
ggtcaaccagggccagtgggcccccagggctacaccgggcctcccgggctacagggcttc
ccagggctgcagggccgcaaaggcgacaagggcgaaagaggagcccccgggacagcggga
cccaaaggagatgtgggagcaagaggtgtctctgggttccctggtgctgatggaattccg
ggacacccgggccaaggcgggccccggggccggcctggctatgacggctgcaatgggacc
aggggagacacaggcccacaaggaccctccggccccgcgggatttcccggctcccccggg
ccccaaggacccaaaggacagaaaggtgaaccttatgcactgtctaaagaggaccgcgac
aaatacaggggtgcacctggggagcctggactggtcggattccagggtcctcctggccgc
cctggacctatggggcccatgggtccagttggagcccctggaagaccgggaccacccgga
ccccctggacccaaaggacagccaggcaacagaggactgggcttctacggacagaagggt
gaaaagggtgacgtaggactcccaggacccaacgggatcccgtcagacaccctccacccc
atcgtggggcccaccaggacgaccatccacccagatcagtacaagggcgaaaaggggagc
cgaggggagccgggcatagagggcatctccgtgaagggagaggaaggcatcgtcggcttt
tcaggaccacggggtccttctggcttcgatggagagaaaggatccccaggacagaaagga
agccgagggctggatggctaccagggcacggatgggccccgaggacccaagggggaagca
ggtgaccagggtcccccaggaccacctgcctactcgcctcatccttccctggctaaaggt
gccagaggtgacccaggattcccaggacctcatggggagccaggaagccgcggtgagcca
ggagaccccgggcccacaggaccccctggcctgtcttttggggatgaagatgagaagaga
ggcctcccaggggagatgggacccaaaggcttccaaggagaacctggcatccctgcattc
taccctggcccacccggagctgacggaaagcccggtctcccaggagcccccgggcctgcc
ggaccacctggaccagatggttacctgtttggccttaaaggagcagaaggacgtgtgggc
taccccgggccttccggtttcccaggagctcgagggcagaaagggtggaaaggtgacgct
ggggactgtaaatgtgcagaaagtgaccagttcatcaggggtcttccaggactgccagga
cccaaaggtttctcgggtatcaatggggaaccagggaagaaaggggaccaaggagacccc
ggacagcacggcatccctgggttcccagggttcaagggagtctctggcatcgctggtgtt
cctgggcccaagggaattaaaggggattccagaacaataaccactaaaggtgagagagga
caacccggtgtcccaggtgtgcatggaatgaaaggcgacgacggtgtccctgggcgcgac
ggactcgatggattcccgggcctccctggccctcctggggatggcatccaaggtccccca
ggggacgcaggtcacccaggcatacctggaaccaagggtgttccaggagaaatgggcccc
ccaggactgggcttgccaggccctaagggcgagcatggattccctggagacgctgggcta
cctggaccgccaggcttccccggtcctcctggcccccccggaaccccaggacagccagat
tgtgacacagatgtcaaaaggcccattggaggtgacagacaagagaccttacagccaggt
tgtgtcagaggccccaaaggactgcctggccggccaggacccccaggacccccaggcacc
aaaggcctcagagggatcccgggcttcttaggagctgatggaacaccagggctcaagggc
tttcctggagacccaggccgggaagggttcccaggacccccagggttcatgggacctcgg
ggatccaaaggtgctgtgggcctccctggcccagatggactcccaggccctgttggcctg
cctggaccagctggaccccctggggagaggggacttccaggagaagtgctaggggcccag
cctgggccccggggagatgctggactacctggacacccggggttgaaaggtcttccagga
gagagaggcccccctggattcagaggaagccaggggatgcccggaatgccagggctgaag
ggtcagctgggcttcccgggaccttcgggccagccaggacggcccgggcctccaggacaa
catggattcccaggagctcccggcccagaggggcccttgggtcggccaggtgccccaggc
ctcggaggacttcctggagataggggggaccctggtgacacaggcgtccctggccctgtg
ggcatgaaaggtctctctggagatagaggagatgctggcttctcaggcgagcgaggccac
ccaggaacccctggatttaaaggaatggctggaatgcctggtatccctgggcaaaaaggg
gagagaggttctcctgggatgcacggcttccaaggcatggtggggctcaaaggaagatct
gggttcccaggaaccaaaggagaggcaggattttttggagtgcctggtctgaaaggcctg
gctggagagccgggtgtgaaaggcagccgtggagaccctggtcccccaggaccacctccc
atcatcctgccagggatgaaggacatcaaaggggagaagggcgatgaagggcccatgggc
ctgaaggggtacctgggcttgaaaggaatccaagggatgccggggatccccgggctggca
ggaatcccagggctacctggaaggcccggccacatcaagggagccaaaggagacatcgga
gtccctggcgtaccaggtctgccaggattccctggagtgaccggcccccctggaatcaca
ggattcccagggttcacaggaagccggggtgacaaaggtgctcctgggagagccggcttt
tacggagagattggccctactggggactttggtgatattggggataccatagacttacca
ggaagcccaggcctgaagggagagcggggcattgccggaactccaggtctgaaggggttc
tttggagagaagggagcagagggtgaagttggcttccctgggatagcaggcatgactgga
acccaaggccctcctggacccaaaggacaaacaggcttcccagggctaacagggctgcgg
gggccacagggagatccagggcggatcggagtcaccggcgataaaggcgattctggctgg
cctggcgtgccgggcttaccaggcttcccgggaattcgagggatcagcggattacatggc
ctgccgggcaccaaaggcttcccagggtccccaggtgctgacatccacggagaaccagga
ttcccaggacctactggggacaggggtgacccaggagaggccaacacccttccaggcccc
acaggagtcccaggacggaaaggggagcagggagccccaggggaacgaggtccagccggg
agtccaggactccaggggttccctggtatcacccccccttccaacatctctgggtcacca
ggtgacaaaggagcaccaggcatatttggcctagaaggctaccgaggcccaccggggcca
cctgggcctgcagcctttcctgggagcaaaggagatgatgggaatccaggagcttcagga
gtccctgggaacaaaggctgggtcggggacccagggccacagggccggcctggtgtgttt
ggtctcccaggagaaaaaggccccaggggcgaaccaggattcatgggtaacactggagcc
accggcactgtgggcgaccgaggccccaaggggcccaaaggagaccagggattccctggt
gctcctggttctctgggatccccagggattgcaggagtccccctgacaatttctgtccag
cctgggacaatgggcccccaggggaggagaggtccccctggggcacagggggagatgggg
ccccaaggccctcctggagagccaggttttcgaggagctccagggaaggctggaccccag
ggaagaggcggtgtgtctgctatcccagggttccgaggagaccaagggcctatggggcac
cagggaccagttggccaagaaggggagccaggccgtccagggatcccaggcctgcccggc
atgccaggccgcagtgtcagcatcggctacctcctggtgaagcacagtcagacggaccag
gagcccatgtgccccgtgggcatgaacaagctctggagcggatacagcctgctgtacttt
gaaggccaagagaaagcccacaaccaggacctggggctggcgggctcctgcctggcgcgc
ttcagcaccatgcccttcctgtactgcaacccgggcgacatctgctactatgccagccgc
aacgacaagtcctactggctctccaccacggccccgctgcccatgatgccggtggccgag
gatgacatcaagccctacatcagccgctgctcggtgtgtgaggccccagcagtggccatc
gcagtccacagtcaggacgtctctatcccccactgccccgccggctggcgcagcttgtgg
atcggatattccttcctcatgcacactgcagctggggacgaaggcggtggccagtcactg
gtgtcgccgggcagctgcctggaggacttccgcgccacgccgttcatcgagtgcaacggg
gcccgtgggacctgccactactacgccaacaagtacagcttctggctgaccaccatcccc
gagcagagcttccagggcacgccctcggcagacacactcaaggccggcctcatccgcacg
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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integrated database retrieval system
