Marmota marmota marmota (Alpine marmot): 107140961
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Entry
107140961 CDS
T09644
Symbol
Pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X2
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107140961 (Pan3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107140961 (Pan3)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107140961 (Pan3)
mRNA degradation factors
3'-5' decay
Pan complex
107140961 (Pan3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
107140961
NCBI-ProteinID:
XP_015339662
Ensembl:
ENSMMMG00000021592
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MELRASSMLVPGMDGGALTDTSLTDSFFSTSFIGVNGFGSPVETKYPLMQRMTNSSSSPS
LLNDSAKPYAGHDALSSPASSLFNDFGALNISQRRKPRKYRLGMLEERLVPMGSKARKAK
NPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNVSQSNMSAF
SQVFSHPSMGSPASAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPASYMVPSS
ASTPVNNAVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYM
QPKANAPSFFMADELRQELINRHLITMAQIDQADMPVPTEVDSYHSLFPLEPLPPPNRIQ
KSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVF
TTKAFSEPSLVFAYDFHAGGETMMSRHFNDPNADSYFTKRKWGQHDGPLPRQHAGLLPES
LIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNP
LALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTD
QNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPE
FQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISR
DEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggaactcagggcctcaagcatgctagttcctggaatggatggaggtgctttaactgat
acaagtctcacagattcctttttcagcaccagctttattggagtcaatggctttggaagc
ccagtagaaacaaagtaccccttgatgcagaggatgactaacagtagcagctccccaagc
cttctaaacgacagtgccaagccatatgcaggccatgatgctctaagttcacctgcttca
tccttgtttaatgactttggtgccctcaacatctctcagaggagaaagccaagaaagtat
cgcctggggatgctggaggagaggctagtaccgatgggatcaaaggcacgaaaagcaaag
aaccctattggctgccttgctgacaggtgtaaatcaggagtacccatcaatatggtttgg
tggaacagagtcacagaaaacaatttacagacaccaaatcctactgcaagcgagtttatt
cctaaaggaggatcaacctccaggctgagtaacgtgtcccagtcaaatatgtctgccttc
tctcaagttttctctcacccttccatgggaagccctgcttctgctggattagcaccagga
atgtcattgtctgctggatcttcccctcttcattcccccaagattactccacatacttct
cctgctcccagaagaagaagtcacactccaaatccagcaagttatatggtgccttctagt
gcctctacacctgttaataatgctgtttctcagactccatcttctggtcaggttatccag
aaggaaactgttggtgggaccacttacttctatacggacacaactccagcacctttgact
ggaatggtatttccaaactaccatatttatcctccaactgcacctcatgttgcgtatatg
caaccaaaagcaaatgcaccttccttcttcatggctgatgaactccgacaggagctgatc
aacagacatttaataacaatggctcaaatcgatcaagcagatatgccagtccccacagaa
gttgacagctaccatagcctattccctctagaaccactgccaccccccaaccggatacag
aaatcaagtaattttggatatattacatcttgctacaaagctgtaaatagcaaagatgat
ctgccatattgccttcggaggatacatggttttcgtcttgttaacacaaagtgcatggtg
ttggttgatatgtggaaaaaaattcagcactcaaatattgtaaccctgcgtgaagtattt
accactaaagcattctccgagccttctcttgtgtttgcatatgatttccatgctggagga
gaaactatgatgagcagacactttaatgaccctaatgctgattcctatttcacaaagaga
aaatggggccaacacgatggaccgttgcctagacagcatgctggattattaccagaatct
cttatttgggcatacattgtccagctgagttctgcattgcgaaccattcacacagcaggt
ttggcatgtcgagttatggacccaacaaagattctgataacgggcaaaacaaggttacga
gtaaattgtgttggagtttttgatgttttgacatttgataacagtcaaaataataatcca
ttggcattgatggctcagtatcagcaagcagatctgatatcattaggaaaagttgtgttg
gctttggcttgcaactctttggcaggaatacagcgagagaatttacagaaagccatggaa
ttagtgacaatcaactactcctctgacctgaagaatctgatcttgtatttgttgactgac
caaaataggatgcgaagtgtaaatgacatcatgcccatgattggtgctcgattttatact
caattggatgctgctcaaatgagaaatgatgtcattgaagaagaccttgcaaaggaagtt
caaaatggaagactgtttaggcttctagcaaaattgggaacaatcaatgagaggccggag
tttcagaaggatcctacttggtcagagactggagaccgttatctgttgaaactctttagg
gatcatctttttcatcaggtgacagaagcaggtgctccctggattgacctcagtcatatc
atttcttgtcttaacaagctagatgctggtgtgccagaaaaaataagcctgatttccaga
gatgagaagagtgtacttgtggtgacttacagtgacttaaagcgctgctttgaaaatact
tttcaagaactgattgcagctgcaaatggtcagttgtag
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