Marmota marmota marmota (Alpine marmot): 107140969
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Entry
107140969 CDS
T09644
Symbol
Hmgb1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410
Base excision repair
mmma04140
Autophagy - animal
mmma04217
Necroptosis
mmma04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107140969 (Hmgb1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107140969 (Hmgb1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
107140969 (Hmgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107140969 (Hmgb1)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107140969 (Hmgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107140969 (Hmgb1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
107140969 (Hmgb1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107140969 (Hmgb1)
MMR (mismatch excision repair)
Other MMR factors
107140969 (Hmgb1)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107140969 (Hmgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
107140969
NCBI-ProteinID:
XP_015339670
Ensembl:
ENSMMMG00000021875
UniProt:
A0A8C6A4I3
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccgtcg
gccttcttcttgttctgttctgagtatcgccccaaaatcaagggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacactgctgcagatgat
aagcagccttatgaaaagaaagctgccaagctgaaggaaaaatacgaaaaggatattgct
gcctaccgagctaaaggaaaacctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaagag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system