Marmota marmota marmota (Alpine marmot): 107141252
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Entry
107141252 CDS
T09644
Symbol
Lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107141252 (Lrba)
Membrane trafficking [BR:
mmma04131
]
Endosome - Lysosome transport
Others
Others
107141252 (Lrba)
Endosome - Golgi transport
107141252 (Lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107141252 (Lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
SUKH_6
EIF3I
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
107141252
NCBI-ProteinID:
XP_048669448
LinkDB
All DBs
Position
Unknown
AA seq
2426 aa
AA seq
DB search
MLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDYRQYLSDEVDLTICSTLLAFIMELLK
NSIAMQEQMLACKGFLVIGYSLEKSSKSHVSRAVLELCLAFSKYLSNLQNGMPLLKQLCD
HILLNPAIWIHTPAKVQLMLYTYLSTEFIGTVNIYNTIRRVGTVLLIMHTLKYYYWAVNP
QDRSGITPKGLDGPRPNQKEILSLRAFLLMFIKQLVMKDSGVKEDELQAILNYLLTMHED
DNLMDVLQLLVALMSEHPNSMIPAFDQRNGLRVIYKLLASKSEGIRVQALKAMGYFLKHL
APKRKAEVMLGHGLFSLLAERLMLQTNLITMTTYNVLFEILIEQICTQVIHKQHPDPDSS
VKIQNPQILKVIATLLRNSPQCQESMEVRRAFLSDMIKLFNNSRENRRSLLQCSVWQEWM
LSLCYFNPKNSDEQKITEMVYAIFRILLYHAVKYEWGGWRVWVDTLSITHSKVTFEIHKE
NLASIFREQQGKVDEEIEPCSSSSVQVITGISRDVDISLGSQQSDMKDSPLSPHFTTNSA
ENSSIEKTSSVDSAPNIELQMQNISNEDRKTEQENQELLAEVTLEEIATNETKNAGDLEV
SSDIAESVTIFSNSFKTVDKDTTVISEITASLSSPSEEDASEMPELLEKSIAEEEEEDDY
VELKVEGSPTEEASLHTALQDNSLSPVASEASESLDTLSNDCKLIFKEEEPVTKKQSDSE
AQDSKDSGFLALPASGSSATSPEITVSQTTVQSDVEQMLEKGQKTADLAGETISTSDCHG
NIFEAPATSEQKIAKLDVSTVATDTERLELKASANTEPPQPQRHVLEMSRQQEQPEQGTA
PDVVDGQRRDSRSALFRIPEFKWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSS
DNVIFVHNTIHLVSQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQ
RLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQCLRLVCAVAVRNCLECQQHSQLKVRG
DTGKGLKTTSSIVLLGKSAAKSPVDIVTGGISPVRDLDRLLQDMDINRLRAVVFRDIEDS
KQAQFLALAVVYFISVLMVSKYRDILEPQNEKCNQSFKETGSENGNSSLPDVENTPAALS
PLTPSSVEESVESTSSARRRDSGIGEETAAGLGSNVYVTPSTAPLGVSAGPDAISEVLCT
LSLEVNKSQETKNDGGNELDNKATPSVPISKNVNVKDILRSLVNIPADGVTVDPALLPPA
CLGALGDLSVEQPVQFRSFDRSVIIATKKSAALPSTLTPNVSAHAVSVVSSVDSAQASDV
GGESPGSRSSNAKLPSVTTVGSVPQDPVSNMSITERLEHALEKAAPLLREIFVDFAPFLS
RTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRL
LSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESLCAQYSADKREEEKMCDHLIRAAK
YRDHVTATQLIQKIINILTDKHGAWGNSAVSRPREFWRLDYWEDDLRRRRRFVRNPLGST
HPEATLKTAVEHGQCINHSLPVAAAADEDILAKGKQSIKSQALGNQNSENEVLLEGDDDT
LSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKI
LAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDPATVKKVVNYLPR
VGIGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMFLNTIAGRGYNDLNQ
YPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAFFAERFESWEDDQVPKFHYG
THYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSVSRAWRNSQRDTSDIKELIP
EFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVRINRLALESEFVSCQLHQ
WIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLL
IEPHPPRGSAMQAYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGWAAPAVI
TVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVH
SQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLTRSESYIGGNCYI
LSGSRDATLLLWYWNGKSSGIGDNPGGETTTPRAILTGHDCEITCAAVCAELGLVLSGSQ
EGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGCFCTFSVNGKLQATVE
TDDHIRAIQLSRDGQYLLTGGDNGVVMVWQVSDLKQLFAYPGCDAGIRAMALSHDQRCII
SGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
7281 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggatgtgaaggcagttttaacacattccattcaaagtgctatgcattcaatt
ggaggagtacaagtgctatttccactttttgcacagttggattataggcaatatttatct
gatgaagttgacttgacaatctgttcaaccctgttggctttcataatggagctgttgaag
aactcgattgctatgcaggagcagatgcttgcctgtaaaggcttcttggtaataggatat
agtcttgaaaagtcttccaaatcccatgtcagcagagcagtacttgaactttgccttgca
ttttcaaaatatttgagcaatcttcagaatgggatgcccttactgaagcaattgtgtgat
cacattcttcttaaccctgccatatggattcataccccagccaaggttcagctgatgctc
tatacttatttgtctactgaattcattggtacagtcaacatatataatacgattcgcaga
gttggtacagtgcttctcatcatgcacacactgaagtactactattgggcagtgaatccc
caagaccgaagtggtatcacccccaaaggattagatggaccacgacctaatcaaaaagaa
atactttctctacgagcattcttgttgatgttcattaagcaattagtcatgaaggattct
ggagtgaaagaagatgaactgcaggccattcttaattacctattgacaatgcatgaggat
gacaatctaatggatgtcctacagctgcttgttgcattaatgtcagagcatcctaactct
atgattcctgcttttgaccaaaggaatgggttacgtgttatttacaaacttctggcatca
aaaagtgaagggatacgagtacaagctctcaaggcaatgggctattttttaaaacatctg
gccccaaagagaaaagcagaagtcatgcttgggcatggattgttttcattgctagctgag
agactcatgcttcagacaaatctaataacaatgaccacatataatgttctttttgagatt
cttattgaacagatttgtactcaggtgatacataaacagcatccagatcctgattcttca
gtaaagattcaaaatcctcagatactaaaagtaattgcgaccctacttcgaaattctccc
cagtgccaagagagcatggaggttcgccgagcctttctttctgacatgattaaacttttt
aataacagtagagaaaacaggaggagcttgctacagtgttctgtgtggcaagagtggatg
ctttctctctgctattttaatcccaagaattcagatgagcaaaagataacagaaatggta
tatgccatattcagaatcctactttaccatgcagtcaaatatgagtggggtggctggcgt
gtgtgggtagacaccttatcaatcacacattcaaaggtcacttttgaaatacacaaagaa
aaccttgccagtatatttagggaacagcaaggaaaagttgatgaagaaatagagccatgt
tcctcaagttcagtccaagtcatcactggcattagcagagatgtggatatttcattggga
tctcagcagtcagacatgaaggattctcctctctctcctcatttcaccacaaatagtgct
gaaaactcaagtattgagaagacaagttcagtagactctgcacccaacattgaactgcaa
atgcaaaatatatctaatgaagacaggaaaactgagcaagaaaatcaggagttactggct
gaagtcactttggaagaaatagcaacaaatgagacaaagaatgcaggtgatttagaagta
tcttctgacatagcagaatctgtgactattttctctaattcttttaaaacagttgacaaa
gacacaaccgtcatcagtgaaataactgcttctctaagttccccctcagaagaggatgct
tcagagatgccagagttactggaaaaatctatagcagaggaagaagaagaagatgattat
gtggaactgaaggtagaaggtagtcccactgaggaagccagtctgcacacagctcttcaa
gataatagtttgtctccagttgcttctgaggccagtgaaagcctggacacacttagtaat
gactgcaaattaatatttaaagaggaagaacctgttactaaaaagcaaagtgatagtgaa
gctcaagattctaaagattctgggttcttggctttgccagcatcagggtcttctgctacc
tcaccagagatcactgtttcccaaacaactgtacaatcagatgttgaacagatgctggag
aaagggcagaaaacagctgaccttgctggagaaaccatatcaactagtgattgtcatggt
aatatcttcgaggctcctgctacttctgagcaaaagattgccaagttggatgtttctact
gttgctacagataccgagagactggaattaaaagccagtgcgaacacagaaccacctcaa
cctcagcgccatgtgcttgagatgtcaaggcaacaggaacagccagaacaaggaacagcc
ccagatgtggttgacggacaaaggagagattccagatctgctctatttcgtattcctgag
ttcaagtggtctcaaatgcatcagcgtttgctcactgatctcttattttccatagaaaca
gatatacagatgtggagaagccattcaacaaagacagttatggacttcgtgaatagcagt
gataatgtcatctttgtacacaacacaattcatctcgtctctcaagtgatggacaatatg
gttatggcttgtgggggtatactgccattgctttcagctgctacatcggctacacatgaa
ctggagaatattgaacctactcaaggcctttccatagaagcctctgtgacatttttgcag
aggctaattagcctcgtggatgtgcttatatttgcaagttctcttggcttcactgaaatt
gaagctgaaaaaaatatgtcatctggaggtattttgcggcagtgtctccgactagtgtgt
gcagtggcagtaaggaattgcttagaatgtcaacaacattcacagctgaaagtcagggga
gatacagggaaaggcctgaaaacaacctcaagcattgttctcttggggaaatctgcagca
aagagtccagtggacattgtgactggtggtatatctccagtaagagatcttgacaggctc
ctgcaagacatggatattaatcgactcagggcagttgttttcagagacatagaggatagc
aaacaagctcaattcttagctctggctgttgtatattttatctctgtccttatggtctca
aagtatagagacattttggaaccccaaaatgaaaagtgtaaccagtcatttaaggaaact
ggtagtgaaaatgggaattcatcactccctgatgtagaaaacacacctgcagcacttagc
cctttaactccatcgtccgttgaagaatcagtggaaagcacatcatctgctcgaaggaga
gactcaggcattggggaggaaacagctgctggtttaggaagcaatgtgtatgtaactcct
tcaacagcacctctgggtgttagtgcaggcccagatgcaatcagcgaggtgctatgcact
ctttcgttagaagtcaataaatctcaagagaccaaaaatgatggaggaaatgaattggat
aacaaagcgacaccctcagttcctatttcaaaaaatgtcaatgtgaaggacattcttcga
agcttggttaacataccagcagatggagtcacagtggatcctgcccttctgccaccagcc
tgccttggtgctcttggtgatctgtctgttgaacaacctgtgcagttcagatcttttgac
agaagtgtcatcattgcaacaaaaaaatcagcagccttaccttccacacttactccaaat
gtatctgcccatgctgtcagtgtggtttcttcagtagattcagctcaagcttcagatgtg
ggaggagagtctccaggcagtagatcatctaatgcaaaattgccctcagttacaacagtt
ggttcagttccacaagaccctgtttcaaatatgagtattacagagagactggaacatgct
ttagaaaaggcagctcctcttctacgagagatttttgtggattttgcaccttttctttct
cggacacttttgggtagccatggacaagagctgcttatagaaggaacaagtctggtttgc
atgaagtctagtagttcagttgtggagttggttatgctactgtgttctcaggagtggcag
aattctattcagaagaatgcaggtcttgcttttattgaacttgtcaatgaaggaaggttg
cttagccaaacaatgaaggatcatctagtaagagtagcaaatgaagcggaatttatcctg
agcaggcagagagcagaggatattcacagacatgcggaatttgagtcactttgtgcgcag
tattctgcagacaaacgagaagaagagaaaatgtgtgatcatttgataagagcagctaaa
tatcgagaccatgtgacagcaactcaactaatccagaaaatcatcaacattctcacagac
aagcatggagcctggggaaattctgcagtgagtcgtcctcgtgagttctggcgccttgac
tactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccctctaggatccaca
catcctgaagcgacactaaaaacagccgtggaacatggtcagtgtataaaccactccttg
ccagtagcagcagctgcagatgaagatatccttgctaaaggaaaacagtccatcaagagt
caggctttaggaaatcagaactcagaaaacgaggtcctcctggaaggtgacgacgatact
ctatcatccgtggatgagaaagatttagagaatcttgccggtcctgttagcctgagcaca
ccagctcagcttgtggccccctctgttgtagtaaagggcactctttctgtcacctcctcc
gaactctattttgaggtggatgaagaggatcccaacttcaagaaaatcgaccccaagatc
ctggcatatactgaagggctgcatggaaaatggctgttcacagagatacgatccatcttt
tctcgtcgttatcttttgcaaaatacagccctggagatctttatggctaacagagttgct
gtaatgttcaacttcccagaccctgcaacagtaaagaaagtggttaactatctacctcgt
gttggtattggaaccagttttggattacctcaaaccaggcgtatttcattagcaagtcca
cgtcagctttttaaagcttctaatatgacccagcgatggcaacaccgagagatttcaaat
tttgagtacttgatgtttctcaacacaatagcaggacgaggttataatgacttaaatcag
tatcctgtatttccctgggtcatcactaattatgaatcagaagaactagatcttaccttg
ccaagcaacttcagagatttgtccaagccaataggagctttgaatccaaaaagagcagca
ttctttgcagaacgttttgaatcatgggaagatgatcaagttccaaagtttcattatggt
actcattactcaactgcgagtttcgttcttgcatggctgctaagaatagaaccttttaca
acttatttcctaaatttgcaaggaggaaaatttgaccatgcagatagaactttttcatca
gtttccagagcatggcgaaatagtcagcgtgatacatctgatattaaggagttgattcct
gaattttattatctccctgagatgtttgtcaacttcaataattataatcttggagtgatg
gatgatgggacagtagtgtctgatgtcgaacttccgccttgggccaaaacctcagaagag
tttgttcgcataaacagattggccctggaaagtgaatttgtttcctgccagcttcaccaa
tggattgatctcatttttggctataagcagcaaggaccagaagctgtgcgagccctcaat
gtgttctattacctgacctatgagggagctgtcaacctgaattcaataactgatcccgtg
ttgagagaggctgtcgaagctcaaatccgaagttttggacagacgccttctcaacttctc
atagagccccatcctcccagaggttctgccatgcaagcgtatctcctcctgcagagtcca
ttgatgttcacagaccaagcccagcaggatgtcatcatggtcctcaagttcccctctaac
tcccctgtcacccacgtggcagccaacacccagcctggctgggctgctcctgctgtgatc
acggtcactgctaatagactctttgctgtgaacaagtggcacaaccttcctgctcatcaa
ggtgctgtacaagaccagccataccagctgccagtggaaatcgatcctctcatagccagc
aatacaggaatgcacaggaggcaaatcactgaccttttagaccaaagtattcaagtccac
tcccagtgctttgtcatcacttcagacaaccgctatattctcgtctgtggcttctgggat
aagagtttccgagtctactctacagacacaggaaaattgatccaagtggtgtttggccat
tgggatgttgtcacttgcctcactcgttctgagtcatatattgggggaaattgctacatt
ctctcagggtcacgtgatgctacgcttctgctgtggtactggaatggaaaaagcagtgga
attggagataacccaggtggtgagactaccacccctcgggccattctgacaggccatgat
tgtgagatcacctgtgctgccgtctgtgccgagctgggcctggtgttgagtggctctcaa
gaaggaccatgtctcatacattccatgaatggagacttgttaaggaccttagagggtccg
gaaaactgcctgaaaccaaaactcatccaggcttcacgagagggtcactgtgtcatcttc
tatgaaaacggctgcttctgcaccttcagtgtgaatgggaagctccaggccactgtggaa
acggatgatcacatcagggccatccagctgagccgggacgggcagtacctgctcacagga
ggagacaacggtgtggtcatggtctggcaggtgtctgacctcaagcaactctttgcctac
ccaggctgcgatgctggaatccgggccatggcactgtctcatgaccagaggtgcatcatt
tctggcatggcttcaggaagcatcgtgctgttttacaacgactttaaccggtggcatcat
gaataccaaacccgctactga
DBGET
integrated database retrieval system
