KEGG   Marmota marmota marmota (Alpine marmot): 107141444
Entry
107141444         CDS       T09644                                 
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013  Nucleocytoplasmic transport
mmma05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107141444 (Ndc1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    107141444 (Ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107141444 (Ndc1)
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107141444 (Ndc1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 107141444
NCBI-ProteinID: XP_048672261
LinkDB
Position
Unknown
AA seq 775 aa
MLQITAGKTSTPGMLYFGTPSPRMQRSSTVPEGRRDYSSQHAAPPPLVSEAPLAPASEGI
FGSQRTVLGVTAPFGGRECREVLARGAYPGQASKEWFLGIRSEKGRAGDIAQRKSACLSC
ISPWVPSPERKWGKVGKNVQNWEECSVALALPGVGDQVLGWRIVASVVWSVLLLPICATV
FIVFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVIIIISIFNVEFYAVMPSIPCSR
LALIGKIFHPQQLMHSFVHAALGMVMAWCAAVITKGRYSFLVVPCSDTESLDSSAARNCL
NEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLIKHSCVESLF
LVRNFCVVYYFLGHIPKAWISTAMDLLIDEYVRLLAHVFPVQLPFAEESDECLPKVLNSN
PPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWAAISRECLNLLNDMTQKLVL
YQEAAATNGRVSSSYPVEPKKLNSPEETTFQTPKSSQMPRSSVPPLVKTSLFSSKLSTPD
VSSPFGSPFGSSMMNRMAGIFDVNTCYGSPQSTQLIRRGPRLWTSASDQQMSEFSNPSME
NMGTSMSAEGKTVRQPNVIYSWIQNKREQIKNFLSRRVLIMYFFSKHPEASIQAVFSDAQ
MHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRIS
GSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgcttcaaatcaccgccgggaagacttcgactcccggcatgctgtactttggaactccg
agtcccagaatgcaacgttcctccacggtcccagaaggtcgtcgagactacagttcccag
catgcagcgccgccgccccttgtttctgaagccccgctggcccctgcttcggagggaatt
tttggatcccagagaacggttcttggagtcacagccccctttgggggacgcgaatgtcgg
gaagttctggcccgtggagcctacccgggacaagcatctaaggaatggttccttgggata
agaagtgagaaaggaagagctggggatatagctcaaaggaagagtgcatgcctatcatgc
ataagcccctgggttccatccccagaacggaagtggggaaaagttgggaagaatgtccag
aattgggaagaatgtagtgtggccttggcacttcctggggttggagaccaggttttgggc
tggaggatagttgcaagtgttgtttggtcagtgttgcttctacccatctgtgctacggta
tttatagtcttcagcagtattgatttatttcatcccatacagtggctgtcagattctttc
aatgatctatatagctcctatgtaatcttttacctcctgctgctgtcagtggtaataata
ataataagtattttcaatgtggagttctatgcagttatgccttccattccatgttccaga
ctggccctgatagggaagatctttcatccccagcaactcatgcactcttttgttcatgct
gccttgggaatggtgatggcttggtgtgcagcagtgataactaagggccgatacagtttt
cttgtggttccctgctctgatactgagagtttagatagctctgcagcacgaaactgttta
aatgaatatcacctttttttcctactggctggagcattcatgggctatagctatagcctt
ctgtattttgttaacaacatgaactatctcccatttcccatcatacagcaatacaagttc
ttgcggtttaggagatctctactcttactcattaagcatagttgtgtggaatcactgttc
ctggttagaaatttctgcgttgtgtattattttcttggtcatattcccaaagcttggatt
agcactgctatggaccttctcatagatgagtatgtcagactcttggctcatgtgttcccc
gttcagctaccatttgcagaggagtcagatgaatgcctcccaaaagttttaaacagcaat
cccccactcatcataaagtatttagccttgcaagacctgatgttactttctcagtattct
ccttctcgaagacaagaagtttttagccttagccaaccaggtggacacccccacaactgg
gcagccatttcaagagagtgtttgaatcttttaaatgatatgactcagaaattggttctc
taccaagaagctgctgctacaaatgggagagtgtcttcatcatacccagtggaacctaag
aaattgaattctccagaagaaactacttttcaaacaccaaaatctagtcagatgcctcga
tcttcagtgccaccattagttaaaacatcattgttttcttcaaaattatctacacctgat
gtttcaagtccttttgggtccccgtttggctctagtatgatgaatcgaatggctggaatt
tttgatgtaaacacctgctatgggtcaccgcaaagtactcagttaataagaagggggcca
agattatggacttctgcttctgatcagcaaatgtcggaattttctaatccttctatggag
aacatgggcacttctatgagtgctgagggtaagactgtgagacaacccaatgtgatttat
tcatggattcagaataaacgtgaacagattaagaatttcttgtcaagacgggtgttgata
atgtattttttcagtaagcatccagaggcctcaattcaggctgtgttttcagatgcccaa
atgcatatttgggcattagaaggtctatcacacttggtagcagcatcatttacagaagat
agatttggagttgttcagacaacgttaccagctatccttaatactttgttaacactgcag
gaggcagttgacaagtacttcaagcttcctcatgcttccagtaaaccaccccggatttca
ggaagccttgtggacacttcttataaaacattaagatttgcattcagagcatcactgaaa
actgccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatct
gcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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