Marmota marmota marmota (Alpine marmot): 107141444
Help
Entry
107141444 CDS
T09644
Symbol
Ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107141444 (Ndc1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107141444 (Ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107141444 (Ndc1)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107141444 (Ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
107141444
NCBI-ProteinID:
XP_048672261
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MLQITAGKTSTPGMLYFGTPSPRMQRSSTVPEGRRDYSSQHAAPPPLVSEAPLAPASEGI
FGSQRTVLGVTAPFGGRECREVLARGAYPGQASKEWFLGIRSEKGRAGDIAQRKSACLSC
ISPWVPSPERKWGKVGKNVQNWEECSVALALPGVGDQVLGWRIVASVVWSVLLLPICATV
FIVFSSIDLFHPIQWLSDSFNDLYSSYVIFYLLLLSVVIIIISIFNVEFYAVMPSIPCSR
LALIGKIFHPQQLMHSFVHAALGMVMAWCAAVITKGRYSFLVVPCSDTESLDSSAARNCL
NEYHLFFLLAGAFMGYSYSLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLIKHSCVESLF
LVRNFCVVYYFLGHIPKAWISTAMDLLIDEYVRLLAHVFPVQLPFAEESDECLPKVLNSN
PPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHNWAAISRECLNLLNDMTQKLVL
YQEAAATNGRVSSSYPVEPKKLNSPEETTFQTPKSSQMPRSSVPPLVKTSLFSSKLSTPD
VSSPFGSPFGSSMMNRMAGIFDVNTCYGSPQSTQLIRRGPRLWTSASDQQMSEFSNPSME
NMGTSMSAEGKTVRQPNVIYSWIQNKREQIKNFLSRRVLIMYFFSKHPEASIQAVFSDAQ
MHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRIS
GSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatcaccgccgggaagacttcgactcccggcatgctgtactttggaactccg
agtcccagaatgcaacgttcctccacggtcccagaaggtcgtcgagactacagttcccag
catgcagcgccgccgccccttgtttctgaagccccgctggcccctgcttcggagggaatt
tttggatcccagagaacggttcttggagtcacagccccctttgggggacgcgaatgtcgg
gaagttctggcccgtggagcctacccgggacaagcatctaaggaatggttccttgggata
agaagtgagaaaggaagagctggggatatagctcaaaggaagagtgcatgcctatcatgc
ataagcccctgggttccatccccagaacggaagtggggaaaagttgggaagaatgtccag
aattgggaagaatgtagtgtggccttggcacttcctggggttggagaccaggttttgggc
tggaggatagttgcaagtgttgtttggtcagtgttgcttctacccatctgtgctacggta
tttatagtcttcagcagtattgatttatttcatcccatacagtggctgtcagattctttc
aatgatctatatagctcctatgtaatcttttacctcctgctgctgtcagtggtaataata
ataataagtattttcaatgtggagttctatgcagttatgccttccattccatgttccaga
ctggccctgatagggaagatctttcatccccagcaactcatgcactcttttgttcatgct
gccttgggaatggtgatggcttggtgtgcagcagtgataactaagggccgatacagtttt
cttgtggttccctgctctgatactgagagtttagatagctctgcagcacgaaactgttta
aatgaatatcacctttttttcctactggctggagcattcatgggctatagctatagcctt
ctgtattttgttaacaacatgaactatctcccatttcccatcatacagcaatacaagttc
ttgcggtttaggagatctctactcttactcattaagcatagttgtgtggaatcactgttc
ctggttagaaatttctgcgttgtgtattattttcttggtcatattcccaaagcttggatt
agcactgctatggaccttctcatagatgagtatgtcagactcttggctcatgtgttcccc
gttcagctaccatttgcagaggagtcagatgaatgcctcccaaaagttttaaacagcaat
cccccactcatcataaagtatttagccttgcaagacctgatgttactttctcagtattct
ccttctcgaagacaagaagtttttagccttagccaaccaggtggacacccccacaactgg
gcagccatttcaagagagtgtttgaatcttttaaatgatatgactcagaaattggttctc
taccaagaagctgctgctacaaatgggagagtgtcttcatcatacccagtggaacctaag
aaattgaattctccagaagaaactacttttcaaacaccaaaatctagtcagatgcctcga
tcttcagtgccaccattagttaaaacatcattgttttcttcaaaattatctacacctgat
gtttcaagtccttttgggtccccgtttggctctagtatgatgaatcgaatggctggaatt
tttgatgtaaacacctgctatgggtcaccgcaaagtactcagttaataagaagggggcca
agattatggacttctgcttctgatcagcaaatgtcggaattttctaatccttctatggag
aacatgggcacttctatgagtgctgagggtaagactgtgagacaacccaatgtgatttat
tcatggattcagaataaacgtgaacagattaagaatttcttgtcaagacgggtgttgata
atgtattttttcagtaagcatccagaggcctcaattcaggctgtgttttcagatgcccaa
atgcatatttgggcattagaaggtctatcacacttggtagcagcatcatttacagaagat
agatttggagttgttcagacaacgttaccagctatccttaatactttgttaacactgcag
gaggcagttgacaagtacttcaagcttcctcatgcttccagtaaaccaccccggatttca
ggaagccttgtggacacttcttataaaacattaagatttgcattcagagcatcactgaaa
actgccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatct
gcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
DBGET
integrated database retrieval system