KEGG   Marmota marmota marmota (Alpine marmot): 107141527
Entry
107141527         CDS       T09644                                 
Symbol
Pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    107141527 (Pum1)
SSDB
Motif
Pfam: PUF PUF_NOP9 DUF6922
Other DBs
NCBI-GeneID: 107141527
NCBI-ProteinID: XP_048671863
Ensembl: ENSMMMG00000011433
LinkDB
Position
Unknown
AA seq 1062 aa
MNSLKASIIFNLQQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTSDHSVSQPIMVQ
RRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDADSDEND
KGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPGNCQNSANEVDL
LGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQFDYSGTQVPVDS
AAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMFSAGLAPAAFVP
NPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATN
SANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQGLAAG
MPGYPVLAPAAYYDQTGALVVNAGARNGIGAPVRLVAPAPVIISSSAAQAAVAAAAASAN
GAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSNNLASSSFYGNNSLSSNSQSSSLFSQGSA
QPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRTSSSLTP
IGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGRYIS
AAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQL
REIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFF
EFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKC
VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLP
ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK
CVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKI
RPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq 3189 nt   +upstreamnt  +downstreamnt
atgaattctttaaaagcatctattatttttaatttgcagcagctcttgccaggtaaaaag
ttttgggaaacagatgaatccagcaaagatggaccaaaaggaatattcctgggtgatcaa
tggcgagacagtgcctggggaacatcagatcattcagtttcccagccaatcatggtgcag
agaagacctggtcagagtttccatgtgaacagtgaggtcaattctgtactgtcccctcga
tcggagagtgggggactaggcgttagcatggtggagtatgtgttgagctcatccccgggc
gattcctgtctaagaaaaggaggatttggcccaagggatgcagacagtgatgaaaacgac
aaaggtgaaaagaagaacaagggtacgtttgatggagataagctaggagatttgaaggag
gagggtgatgtgatggacaagaccaatggtttaccagtgcagaatgggattgatgcagac
gtcaaagattttagccgtacccctggtaattgccagaactctgctaatgaagtggatctt
ctgggtccaaaccagaatggttctgagggcttagcgcagctgaccagcaccaatggtgcc
aagcctgtggaggatttctccaatatggagtcccagagtgtcccattggaccccatggaa
catgtgggcatggagcctcttcagtttgattattcaggcacgcaggtgcctgtggactca
gcagcagcaactgtgggactttttgactacaattctcaacaacagctgttccaaagacct
aatgcgcttgctgtccagcagttgacagctgctcagcaacagcagtatgcactagcagct
gcacatcaacctcacatcggtatgttttcagcaggtttagctcccgctgcgtttgtcccc
aatccatacatcatcagtgctgctcccccagggacggacccctacacagctggattggct
gcagcagcgacgctaggcccagctgtggtccctcaccagtattatggagtcacaccctgg
ggagtctaccccgccagtctttttcagcagcaagctgctgctgcagcagcagcaactaat
tctgctaatcagcagaccaccccacaggctcagcaaggacagcagcaggttctccgtgga
ggagccagccagcgtcctttgaccccaaatcagaaccagcagggacagcaaacagaccca
ctagtggcagctgcagctgtaaattctgctcttgcctttggacaaggtctggctgcaggc
atgccaggttatccagttttggctcctgctgcttactatgaccaaactggtgcccttgtg
gtgaatgcaggagcaagaaatggtattggagctcctgttcggcttgtagctcctgcccca
gtcatcattagttcctcagctgcacaagcagctgttgcagcagctgcagcttcagcaaat
ggagctgctggtggtcttgctggaactacaaacggaccatttcgccctttaggaacccag
cagcctcagccccagccccagcagcagcccagtaacaacctggcatccagctctttctat
ggcaacaactctctgagcagcaactcacaaagcagctccctcttctcccagggctctgcc
caacctgccaacacatccttgggatttggaagtagcagttctcttggtgccaccctggga
tcagcccttggaggatttggaacagcagttgcaaactccaacactggcagtggctcccgc
cgtgactccctgactggcagcagtgacctttataagaggacatcgagcagcttgaccccc
attggacacagtttttataacggccttagcttttcctcctctcctggacccgtgggcatg
cctctccctagtcagggaccaggacattcacagacaccacctccttccctctcttcacat
ggatcctcttcaagcttaaacctgggaggactaacaaatggcagtggaagatacatctct
gctgctcccggtgctgaagccaagtaccgcagcgcaagcagcgcctccagcctcttcagc
cccagcagcacccttttttcttcctctcgtttacgatacggaatgtctgatgtcatgccc
tctggcaggagcagacttttggaagattttcgaaataaccggtaccctaatttgcaactt
cgggagattgctggacatataatggaattttcccaagaccagcatgggtccagattcatt
cagctgaaactagagcgtgccacagcagctgagcgccagcttgtcttcaatgaaatcctc
caggctgcttaccaactaatggtggatgtgtttggaaattatgtcattcagaagttcttt
gaatttggcagccatgaacagaagctggctttggcagaacggattcggggccacgtcttg
tcgttagcgctacagatgtacggctgccgagttatccagaaagctcttgaatttattccc
tcagaccagcaggtaattaacgagatggttcgggaactggatggccacgtcctgaaatgt
gtaaaagaccagaatggcaatcacgtggtccagaaatgcattgaatgtgtgcagccccag
tctttgcagtttattatcgacgcgtttaaggggcaggtgtttgctttgtccacgcaccct
tatggctgccgagtgattcagagaatcctggagcattgtctccctgaccagaccctccct
atcctagaggaacttcaccagcacacagagcaacttgtacaggatcagtatggaaattat
gtaatccagcatgtattagaacatggtcgtcctgaggataaaagcaaaattgtagcagaa
attcgaggcaatgtacttgtgttgagtcagcacaaatttgcaagcaatgttgtggagaag
tgcgtcacccacgcctcacgtacagagcgtgctgtgctcatcgatgaggtctgcaccatg
aacgatggtccccacagtgccttatataccatgatgaaggaccagtatgccaactatgtg
gtccagaaaatgattgatgtggcagagccgggccagcggaagattgtcatgcataagatc
cggccccatattgcaactcttcgcaagtacacctatggcaagcacatcctggccaagctg
gagaaatactatatgaagaatggtgtggacttggggcccatctgtggcccccctaatggt
atcatctga

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