Marmota marmota marmota (Alpine marmot): 107141695
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Entry
107141695 CDS
T09644
Symbol
Atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04136
Autophagy - other
mmma04140
Autophagy - animal
mmma04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
107141695 (Atg4c)
04140 Autophagy - animal
107141695 (Atg4c)
04136 Autophagy - other
107141695 (Atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmma01002
]
107141695 (Atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107141695 (Atg4c)
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107141695 (Atg4c)
Peptidases and inhibitors [BR:
mmma01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107141695 (Atg4c)
Membrane trafficking [BR:
mmma04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107141695 (Atg4c)
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107141695 (Atg4c)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
107141695
NCBI-ProteinID:
XP_015340401
Ensembl:
ENSMMMG00000013865
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKVLP
SKSACTIEDRIIAGNVEEFRKDFISRIWLTYREEFPQIEGSSLTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSESESWTSHTVKKITSSFETSLSGEREPETPTISLKE
TIGKCPNDQEMQNEIFHRKIISWFGDSPLAVFGLHQLIEYGKKSGKSAGDWYGPGVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYNSDVIDKQSASMTSDNADDKAVIILVPVRLGGE
RTNTDYLEFVKGVLSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVKDFERASEEITKMMDGSRGVKKNIDYKML
KISSKEKYPLFTFVNGHSRDFDITSTTTNEEDLFLEDEKKRLKRVSTEEFVLL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacgggaacagatgaagttgacaagctaaaaactaaatttatatcagcatgg
aacaacatgaaatatagttgggttttgaaaacaaagacatattttagtagaaattctcca
gttttattgcttggaaaatgttaccattttaaatatgaagatgaaaataaagtgttacct
tcaaaatcagcatgtacaatagaagatcgcataattgcaggaaatgtagaagaatttcgg
aaagatttcatttctagaatatggctgacctacagggaagaatttcctcaaatagaaggc
tcatctttgacaacagattgtggttggggatgtacgttgagaactggccagatgctactg
gctcaaggactcatactacattttcttggtagagcttggacctggcctgatgcattgaat
attgaaaattcagagtctgaatcatggacttcccacactgtaaaaaaaattacatcatca
tttgaaacatcgctttcaggggaaagagaacctgaaactccaacaatttctctgaaggaa
acaattgggaaatgtcctaatgatcaggagatgcaaaatgaaatttttcacaggaaaatc
atctcttggtttggtgattccccattggctgtctttggcttacatcagttaatagagtat
ggaaagaagtctgggaaaagtgctggagattggtatgggccaggtgttgttgctcacatt
ttaagaaaagcagtcgaagaagcaagacaccctgacttacaaggaataactatttatgtt
gcacaagattgtacagtttacaattctgatgtaattgataaacagagtgcttccatgacc
tctgataatgcagatgacaaagctgttattattttagttcctgttagacttggtggagaa
agaaccaacaccgactacctagagtttgtgaagggtgttctgagccttgaatattgtgtg
ggtattattggtggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttt
cctcttgagacattccactgcccttctcccaaaaagatgtcgtttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttaaggacttcgaacgagcttctgaagaa
ataactaagatgatggatggctcaaggggagtaaagaagaatattgattacaagatgctg
aagatttcttctaaggagaaatatcccttatttacttttgtaaatggtcattccagagac
tttgacattacgtctactacaaccaatgaagaagaccttttcttagaggatgagaagaaa
agattaaaaagagtcagtacagaagagtttgtcctcctataa
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integrated database retrieval system
