Marmota marmota marmota (Alpine marmot): 107141765
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Entry
107141765 CDS
T09644
Symbol
Prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107141765 (Prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmma03041
]
107141765 (Prpf38a)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107141765 (Prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
107141765 (Prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
107141765
NCBI-ProteinID:
XP_015340481
Ensembl:
ENSMMMG00000016248
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRRSGGLTSLFNSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRH
RSHSKSPERSKKSHKKSRRGNE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagtaaaggatgcgcatagcatccatggaaccaaccctcaatattta
gtggagaagatcattcggacacgaatctatgaatctaagtactggaaagaagagtgtttt
ggacttaccgctgaacttgttgtagataaagccatggagttacggtttgtgggtggcgtc
tatggtggaaacataaaaccaactccctttttgtgtttaaccttgaagatgcttcagatt
caacctgaaaaggatatcattgtagaatttataaaaaatgaagacttcaagtatgtccgc
atgttgggggcactttacatgagactgacaggtactgcaattgattgctacaagtacttg
gagcctttgtacaacgactatcgaaaaatcaagagccagaacagaaatggggagtttgaa
ctgatgcatgttgatgaatttattgatgaactgttgcacagtgagagagtctgtgatatc
attttgccccggctacagaaacgctatgtgctagaggaagctgagcaactggaacctcga
gttagtgctctagaagaggacatggatgatgtggagtccagtgaggaggaggaagaagaa
gatgagaagttggaaagagtaccatcacctgaccaccgccgcagaagctacagagacttg
gacaagccccgtcgctctccaacgttgcgctacaggaggagtaggagtcggtctcccaga
aggcggagtcgatctcccaaaagacgaagatctggtgggttgaccagtcttttcaacagc
ccctcaccccgccgagaaaggcatcggagcaagagtccaagacgtcaccggagcaggtcc
cgtgatcgacgacacagatctcgctccaagtctccaggtcatcaccgaagtcacagacat
aggagccattcaaaatctcctgaaaggtctaagaaaagccacaagaagagccggagaggg
aatgaatag
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integrated database retrieval system
