Marmota marmota marmota (Alpine marmot): 107141860
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Entry
107141860 CDS
T09644
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmma04515
]
107141860
Cell adhesion molecules [BR:
mmma04515
]
Cadherins
Protocadherins
107141860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
107141860
NCBI-ProteinID:
XP_015340618
Ensembl:
ENSMMMG00000011349
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MEAELDKTPRKRQVIFLAMLLFLWEADSEAIRYSMPEETESGYSVANLEKDLGLRVGELA
TRGARIHHKGSKQLLQLDVKTGNLLLQEKLDREVLCGATEPCILHFKLLLENPVQLFKVD
VQLTDINDHSPEFLDREMILRIPESAQQGTMFPLKSAHDFDIGSNSVQNYTISPNSYFHV
ATHNRGDGRKYPELVLDTALDREEESELSLTLTALDGGAPPRSGTITVRIEVVDINDNAP
EFLQSLYKVQVPENSPINSLVLIVSARDLDAGTHGSVAYSLFQGDEVFQPFVIHEKSGEI
RLQRALDFEATQHYIVEIAATDGGGLVGKCTVAIEVVDVNDNVPELTMSTLSSSIPENSP
ETVVAIFSVSDPDSGDNGRMVCSIENDLPFLLKPTFENFYTLVTERPLDRESRAEYNITI
TVIDLGTPSLKTEHSINLLISDVNDNAPAFTQMSYRLLVHENNQPALHIGSVRATDRDSG
TNAQITYSLLPTEDPHLPLASLVSINADNGQLFALRALDFEALQAFQFHVGATDQGSPAL
SSQALVRVVVLDDNDNSPFVLYPMQNASAPCTELVPRAAEQGYLVTKVVAVDGDSGRNSW
LSYQLLKATETGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPEVAPEREQGDSLTVCLVIALASVSLLFLFSVLVFVVVRLCRRRRAVP
LGVCSVPEGHFPGHLVDVSGTGTLSQSYQYEVCLGGNSGTGEFKFLKPIFPNLLVQDAGR
EVKENSSCRNSFVFN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagctagataaaacgccacggaaaaggcaagtcatttttcttgctatgctg
ttgtttttgtgggaggctgactctgaggcaattagatattccatgccagaagaaacagaa
agcggctactctgtggccaacctggaaaaagatctggggctcagggtgggagagctggcc
actcggggtgcgcgaatccatcacaaaggcagcaaacagctcttgcagcttgatgtaaaa
accggcaatttgcttctacaggaaaaactagaccgggaggtgctgtgtggggctacagaa
ccctgcatattgcatttcaaactgttactagaaaacccagtgcagttgtttaaagttgat
gtgcaactgacagatataaatgaccattctccagagttcctagacagggaaatgatcctt
agaatcccagagagtgcacagcaagggacgatgtttcctttgaaatcagctcacgatttt
gatataggtagcaacagtgttcagaactacacaatcagccccaactcctattttcatgtt
gctactcacaatcgcggagatggcagaaaatacccagaactggtgttggacacagccctg
gaccgggaggaagagtctgagctcagtttaacccttacagcgctggatggtggggctcca
cccaggtctgggaccatcacagttcgcattgaggtggtggacatcaatgataatgccccc
gaatttttacagtctttgtataaggtacaagttcctgagaacagtcccataaactcgtta
gttctcattgtctctgctcgagatttagatgcaggaacacacgggagtgtagcctattct
ttatttcaaggtgatgaagtttttcaaccatttgtaatacatgaaaaatcaggagaaatt
cgtctccaaagggcattggattttgaagcaacccaacattatattgtagaaattgcagcc
acagatggtggaggccttgtgggaaaatgcacagtggccatagaagtggtggatgtgaat
gacaatgttcctgaactaaccatgtccacactcagcagctctatcccagaaaactcccca
gagactgtagttgccattttcagtgtttctgatccagactctggggacaatggtaggatg
gtttgctccatagaaaatgatctccccttcctcttgaagccaacatttgagaacttttac
accttggtgacagagaggccactggacagagaaagcagagcagagtacaacatcaccatc
acagtcattgacttggggacacccagtttgaaaaccgagcacagcataaacctcctcatc
tcagatgttaatgacaatgcccctgctttcacacaaatgtcctacaggctgttggtgcat
gagaacaaccagccagctctgcacataggcagtgtcagggccacagatagagactcaggc
accaatgcccagatcacttactcgctgctgcccaccgaggatccacacctgcccctcgcc
tcgctggtctccatcaacgcagacaatgggcagctgttcgcgctgagggcgctggacttc
gaggccctgcaggcgttccagttccatgtgggcgccacagaccaaggttcacctgcgctc
agcagccaggcgctggtgcgcgtggtggtgctggatgacaatgacaactcgcccttcgtg
ctgtacccaatgcagaatgcctctgcgccctgcactgagctggtgcccagggcagcagag
cagggctacctggttaccaaggtggtggcggtggatggagactcaggccggaactcctgg
ctgtcataccagctgctcaaggccacggagacagggctgtttggcgtgtgggcgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacagactggtg
gtgctggtcaaggacaatggcgagcctccgctgtctgccagcgtcacgctgcacgtgctg
ctggtggatggcttctcccagccctacctgccgctcccggaagtggcgcccgagcgcgag
cagggggactcgctcactgtctgtttggtcatcgccttggcctctgtgtcgttgctcttc
ctcttttctgtgttggtgtttgtggtggtgaggctgtgcaggaggcgcagggcggtgccg
ctgggtgtctgctctgtacctgagggccactttcccggccacctggtggacgtcagtggc
actgggacactgtctcagagctaccagtatgaggtgtgtctgggtggaaactctgggact
ggtgagttcaaattcctgaagcccatattccctaaccttttggttcaggatgctgggaga
gaagttaaggaaaattccagctgcagaaatagctttgtattcaactaa
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