KEGG   Marmota marmota marmota (Alpine marmot): 107142001
Entry
107142001         CDS       T09644                                 
Symbol
Hdac1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03082  ATP-dependent chromatin remodeling
mmma03083  Polycomb repressive complex
mmma04110  Cell cycle
mmma04213  Longevity regulating pathway - multiple species
mmma04330  Notch signaling pathway
mmma04350  TGF-beta signaling pathway
mmma04613  Neutrophil extracellular trap formation
mmma04919  Thyroid hormone signaling pathway
mmma05016  Huntington disease
mmma05031  Amphetamine addiction
mmma05034  Alcoholism
mmma05165  Human papillomavirus infection
mmma05169  Epstein-Barr virus infection
mmma05200  Pathways in cancer
mmma05202  Transcriptional misregulation in cancer
mmma05203  Viral carcinogenesis
mmma05206  MicroRNAs in cancer
mmma05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107142001 (Hdac1)
   03083 Polycomb repressive complex
    107142001 (Hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    107142001 (Hdac1)
   04350 TGF-beta signaling pathway
    107142001 (Hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    107142001 (Hdac1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    107142001 (Hdac1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    107142001 (Hdac1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    107142001 (Hdac1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    107142001 (Hdac1)
   05202 Transcriptional misregulation in cancer
    107142001 (Hdac1)
   05206 MicroRNAs in cancer
    107142001 (Hdac1)
   05203 Viral carcinogenesis
    107142001 (Hdac1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    107142001 (Hdac1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    107142001 (Hdac1)
   05165 Human papillomavirus infection
    107142001 (Hdac1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    107142001 (Hdac1)
  09165 Substance dependence
   05031 Amphetamine addiction
    107142001 (Hdac1)
   05034 Alcoholism
    107142001 (Hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmma03036]
    107142001 (Hdac1)
Enzymes [BR:mmma01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107142001 (Hdac1)
Chromosome and associated proteins [BR:mmma03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107142001 (Hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     107142001 (Hdac1)
    BRAF-HDAC complex
     107142001 (Hdac1)
    REST complex
     107142001 (Hdac1)
    SHIP complex
     107142001 (Hdac1)
    MiDAC complex
     107142001 (Hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107142001 (Hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107142001 (Hdac1)
  Chromatin remodeling factors
   NuRD complex
    107142001 (Hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107142001
NCBI-ProteinID: XP_015340813
Ensembl: ENSMMMG00000008831
UniProt: A0A8C5Z541
LinkDB
Position
Unknown
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctgctcaactatggtctctaccgaaaaatggaaatttatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgatgactacatcaaattcttgcgctccattcgt
ccagataacatgtctgagtatagcaagcagatgcagagattcaatgttggtgaggactgt
ccagtattcgatggcctgtttgagttctgtcagttgtctactggtggctctgtcgcaagt
gctgtgaaacttaataagcagcagacagacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatcaggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggatctacgggatattggggctggcaaaggcaag
tattatgctgttaactacccactccgagatgggattgatgacgagtcctatgaggccatt
ttcaagccggtcatgtccaaagtaatggagatgttccagcctagtgcggtggtcttacaa
tgtggctcagattccctatctggggatcggttaggttgcttcaatctgaccatcaaaggg
catgccaagtgtgtggaatttgtcaagagcttcaacctgcctatgctgatgctgggagga
ggtggttacaccattcgtaatgtggcccggtgctggacatacgaaacagctgtggctctg
gacacagagatccccaatgagcttccatacaatgactacttcgagtactttggaccagat
ttcaagcttcacatcagtccttccaacatgactaaccagaacacgaatgagtacctggag
aagataaaacagcggctctttgagaacctgagaatgctgccccatgcacctggggtccaa
atgcaggccattcctgaggatgccatcccagaggagagtggtgatgaggacgaagaagac
cctgacaagcgaatctcaatctgttcctctgacaaacgaattgcctgtgaggaagaattc
tctgactcggatgaggaaggagagggtggccgcaaaaactcttccaacttcaaaaaagcc
aagagagtcaaaacagaggatgaaaaagagaaagacccagaggagaagaaagaagtcaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaagaggaggtcaag
ttggcctga

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