KEGG   Marmota marmota marmota (Alpine marmot): 107142073
Entry
107142073         CDS       T09644                                 
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmma04121]
    107142073 (Wdtc1)
Ubiquitin system [BR:mmma04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107142073 (Wdtc1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_NOL10_N Beta-prop_WDR75_1st TPR_19 DSE1_N TPR_1 TPR_2 TPR_17 ANAPC4_WD40 WD40_RFWD3 PAC11 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 TPR_11 Beta-prop_HPS5 TPR_16 Beta-prop_WDR41 Beta-prop_Aladin ANAPC3 Beta-prop_EIPR1 TPR_14 Beta-prop_WDR35_TULP_N TPR_6 ASA1 TPR_BSK1_C NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_VPS8 Barstar
Other DBs
NCBI-GeneID: 107142073
NCBI-ProteinID: XP_015340921
Ensembl: ENSMMMG00000013616
UniProt: A0A8C5ZI10
LinkDB
Position
Unknown
AA seq 680 aa
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTT
TDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLAT
SGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSG
GAGASDDEDSSEGQVQCRPS
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggcaaaagtcaacattactagagacctcatccgtaggcagatcaaggagcgaggtgcc
ctgagctttgaacggcgctaccatgtcactgacccctttatccggcggctgggcctagaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttccgatgaccagcacacgattgtgtgggacccgctgcatcacaag
aagctgctctccatgcatacaggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacaggagcagctgactccaaggtgcatgtccatgac
ctgacagtaaaggagactatccacatgtttggagatcacacaaaccgggtgaagcgcatc
gccacagcacccatgtggcccaacacgttctggagtgctgctgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcggaggtgctgattgacctgacagagtac
tgtggccagctggtggaggccaagtgcctcacagtcaatccccaggacaacaactgcctg
gctgtaggggccagtgggcccttcgtgaggctctacgacattcgcatgatccataaccat
agaaagagcatgaagcagagcccatcagcaggtgtacacaccttctgtgaccggcagaag
ccccttccagatggtgcagcccagtattatgtagcaggtcacctgccagtgaagctgcct
gactataacaaccgtctgagagtgctggttgccacctatgtgaccttcagccccaatggc
acagagctgctagtcaacatgggaggtgaacaggtctatttgtttgacttgacttacaag
cagcggccatacaccttcctcttgcctagaaaatgccactcctcaggggaagtccagaac
ggcaagatgtctaccaatggtgtgtccaacggcgtgtctaatggcctgcaccttcacagc
aacggcttccgactgccagaaagtagggggcatatcagcccccaggtggagctgccccca
tatctggagcgtgtgaagcagcaagccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagcaaggctgtgcagagggcccctcataatgccatgctctatgga
aaccgagctgctgcctacatgaagcgcaagtgggacggtgaccactatgatgccctaagg
gactgcctcaaggccatatccctaaacccatgccacctgaaggcacacttccgcctggcc
cgctgcctctttgagctcaagtatgtggctgaggccctggagtgcctagacgacttcaaa
gggaagttcccggagcaggcccacagcagcgcttgtgatgctctgggccgtgacatcaca
gctgccctcttctccaaaaatgatggcgaagagaagaagggagctggtggtggtggtggt
ggtggcccagtccgcctccgaagcacaagccgcaaagactccatctcagaagatgagatg
gtcctacgggaacgaagctatgactatcagttccgctactgtggccactgcaacaccaca
acagatatcaaggaggccaatttctttggcagcaacgctcagtacatcgtcagtggctct
gacgatggctccttcttcatctgggaaaaggagaccaccaacctagtgcgcgtgcttcag
ggggatgagtccatcgtcaattgcctgcagccgcatcccagctactgcttcctagccacc
agtggcatcgatcctgtcgtgcgactctggaacccccgaccagagagtgaagacctcacc
ggccgagttgtagaagacatggagggtgcttctcaggccaaccagcggcgcatgaatgca
gaccccttggaagtgatgctgctcaacatgggctaccggatcacaggcctgagcagtggg
ggcgccggggcctctgatgatgaggacagctccgagggtcaggtgcaatgccggcccagc
tag

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