Marmota marmota marmota (Alpine marmot): 107142073
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Entry
107142073 CDS
T09644
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107142073 (Wdtc1)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107142073 (Wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_19
Beta-prop_WDR75_1st
TPR_1
TPR_2
TPR_17
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
TPR_11
Beta-prop_HPS5
TPR_16
ANAPC3
TPR_14
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
TPR_6
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Barstar
Motif
Other DBs
NCBI-GeneID:
107142073
NCBI-ProteinID:
XP_015340921
Ensembl:
ENSMMMG00000013616
UniProt:
A0A8C5ZI10
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPESRGHISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKGAGGGGGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTT
TDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLAT
SGIDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSG
GAGASDDEDSSEGQVQCRPS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacattactagagacctcatccgtaggcagatcaaggagcgaggtgcc
ctgagctttgaacggcgctaccatgtcactgacccctttatccggcggctgggcctagaa
gcagagctgcagggtcactcaggatgtgtcaactgtctggagtggaatgagaaaggagac
ttgctggcctctggttccgatgaccagcacacgattgtgtgggacccgctgcatcacaag
aagctgctctccatgcatacaggacacactgcaaatatcttctctgtcaagttcctgcct
catgctggggaccgcatcttgatcacaggagcagctgactccaaggtgcatgtccatgac
ctgacagtaaaggagactatccacatgtttggagatcacacaaaccgggtgaagcgcatc
gccacagcacccatgtggcccaacacgttctggagtgctgctgaggatgggcttatccgc
cagtatgaccttcgggagaacagcaaacactcggaggtgctgattgacctgacagagtac
tgtggccagctggtggaggccaagtgcctcacagtcaatccccaggacaacaactgcctg
gctgtaggggccagtgggcccttcgtgaggctctacgacattcgcatgatccataaccat
agaaagagcatgaagcagagcccatcagcaggtgtacacaccttctgtgaccggcagaag
ccccttccagatggtgcagcccagtattatgtagcaggtcacctgccagtgaagctgcct
gactataacaaccgtctgagagtgctggttgccacctatgtgaccttcagccccaatggc
acagagctgctagtcaacatgggaggtgaacaggtctatttgtttgacttgacttacaag
cagcggccatacaccttcctcttgcctagaaaatgccactcctcaggggaagtccagaac
ggcaagatgtctaccaatggtgtgtccaacggcgtgtctaatggcctgcaccttcacagc
aacggcttccgactgccagaaagtagggggcatatcagcccccaggtggagctgccccca
tatctggagcgtgtgaagcagcaagccaatgaggcttttgcctgccagcagtggacccag
gccattcagctttacagcaaggctgtgcagagggcccctcataatgccatgctctatgga
aaccgagctgctgcctacatgaagcgcaagtgggacggtgaccactatgatgccctaagg
gactgcctcaaggccatatccctaaacccatgccacctgaaggcacacttccgcctggcc
cgctgcctctttgagctcaagtatgtggctgaggccctggagtgcctagacgacttcaaa
gggaagttcccggagcaggcccacagcagcgcttgtgatgctctgggccgtgacatcaca
gctgccctcttctccaaaaatgatggcgaagagaagaagggagctggtggtggtggtggt
ggtggcccagtccgcctccgaagcacaagccgcaaagactccatctcagaagatgagatg
gtcctacgggaacgaagctatgactatcagttccgctactgtggccactgcaacaccaca
acagatatcaaggaggccaatttctttggcagcaacgctcagtacatcgtcagtggctct
gacgatggctccttcttcatctgggaaaaggagaccaccaacctagtgcgcgtgcttcag
ggggatgagtccatcgtcaattgcctgcagccgcatcccagctactgcttcctagccacc
agtggcatcgatcctgtcgtgcgactctggaacccccgaccagagagtgaagacctcacc
ggccgagttgtagaagacatggagggtgcttctcaggccaaccagcggcgcatgaatgca
gaccccttggaagtgatgctgctcaacatgggctaccggatcacaggcctgagcagtggg
ggcgccggggcctctgatgatgaggacagctccgagggtcaggtgcaatgccggcccagc
tag
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