Marmota marmota marmota (Alpine marmot): 107142114
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Entry
107142114 CDS
T09644
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107142114 (Srrm1)
03015 mRNA surveillance pathway
107142114 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107142114 (Srrm1)
03041 Spliceosome [BR:
mmma03041
]
107142114 (Srrm1)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107142114 (Srrm1)
Spliceosome [BR:
mmma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107142114 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
107142114
NCBI-ProteinID:
XP_015340983
Ensembl:
ENSMMMG00000018360
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR
EFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEK
ESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEK
TPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSR
SRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHR
RSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRH
RPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRK
VELSESEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDEQPKRSHVKNGEVGRR
RRHSPSRSASPSPRKRQKETSPRMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPP
PRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS
PSPPPKRRVSHSPPPKQRSSPVAKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSP
RPRAPQTSSSPPPVRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRR
VSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEG
GGKKKKKKKDKKHKKDKKHKKHKKHKKEKAMAAAAAAPVTPAAIATATTTSAQEEPEAAP
EPKKETESEAEDNLDDLEKHLREKALRSMRKAQVSPQS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacagaaatc
cttggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaat
ccagactccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaacgctaga
gaatttatgggagagctttggcccctactgttaagtgcacaagaaaacatcgctggaatc
ccttctgctttcctagaacttaagaaagaagaaataaaacagagacagattgaacaagaa
aaattggcatctatgaaaaaacaagatgaagacaaagataagagggataaggaagaaaaa
gaaagcagcagagaaaaaagagagaggtctcgaagcccaagaagacgcaaatccagatct
ccttcccctagaagacggtcttcccctgtcaggagagagagaaagcgcagtcattctcga
tctccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaa
actccagagctcccagaaccttcagtgaaagtaaaagaaccttcagtacaagaggccaca
tctacaagtgacatcttgaaagttcccaagcctgaacctataccagagcctaaagaacct
tctcctgaaaaaaattccaaaaaagaaaaggaaaaggaaaagactcgaccaagatctcgg
tcacgttccaaatcaagatcacggacacgttctcggtctccttctcatactcgcccaaga
cggcgccatagatcccgatcaagatcctattcacctagaaggcggccaagcccaagaagg
cggccatctcctcgaagaagaactccaccgagacgaatgcctcctccaccaaggcatcga
aggagtagatctcctgttagacgaagaaggcgttcatcagcatccttgtctgggagtagc
tcatcatcctcttcatctcgttcccggtcaccgccaaagaagcctcccaagaggacatct
agcccccctcgaaaaactcgtaggttatctccttcagcaagtcctcctcggagaagacac
aggccatcacctccagcaactcctccaccaaaaactcgtcattccccaacaccccagcag
tcaaatcgtacaagaaaaagtcgtgtttctgtgtctccagggagaacttcaggtaaagtg
acaaaacataaaggtactgagaaaagagagtcaccttcaccagcaccaaagcctaggaaa
gtagagttatctgaatcagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccagtacagacgacagaaccagcagtcttcttctgactctggctcctcctcc
tcttcagaagatgagcaacccaagagatcacatgtgaagaatggcgaggtaggcaggcgg
cggagacattccccttctcgcagtgcctctccttcaccacggaagcgccaaaaagagacc
tctcctcggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggagaagtccctccccaccacccgcccgaaggcgacgctctccttctcccgctcctcct
cctcggcggcgcagatctcccacaccaccaccacggcgaaggactccttctcctccccct
cgtcggcgctcaccttccccaagaagatactctcctccaatacagaggagatactctcct
tctccacctccaaagagaagaacagcctctcctccacctcctcctaaacggagggcatct
ccatctccaccaccaaagcgccgggtctcccattctcctcctcccaaacagaggagctct
ccagtcgccaagagacgttcgccttctttatcatcaaagcataggaaagggtcttcccca
agccgctctacccgggaggctcggtcgccacaaccaaacaaacggcattctccctcgcca
cggcctcgagctcctcagacatcctcaagtcctccacctgttcgacgaggagcatcagca
tcaccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctccagg
actccagaacctaaaaagacaaaaaaggctgcctcaccaagcccacagtccgtaagaagg
gtctcatcctcccgatctgtctctggatctcctgaaccagcagctaaaaagcccccagca
cctccatcccctgtccagtctcagtcaccctcaacaaattggtcaccagcggtaccggtc
aaaaaggctaaaagcccaacaccgagcccatcgccagccaggaattcagatcaagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaaacacaag
aagcacaaaaaacacaagaaggaaaaggcaatggccgcagctgctgctgcgcctgtgacc
cctgcagccattgccaccgccacaaccacgtcagcacaggaggaacccgaggcagcaccg
gagcccaagaaggagactgaaagtgaagctgaagataaccttgatgacttagaaaagcac
ctgcgagaaaaagccctgaggtccatgcggaaggctcaagtgtcccctcagtcttag
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