Marmota marmota marmota (Alpine marmot): 107142332
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Entry
107142332 CDS
T09644
Symbol
Rp1
Name
(RefSeq) oxygen-regulated protein 1 isoform X1
KO
K19538
retinitis pigmentosa 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mmma03037
]
107142332 (Rp1)
04812 Cytoskeleton proteins [BR:
mmma04812
]
107142332 (Rp1)
Cilium and associated proteins [BR:
mmma03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107142332 (Rp1)
Cytoskeleton proteins [BR:
mmma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
107142332 (Rp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
107142332
NCBI-ProteinID:
XP_015341229
LinkDB
All DBs
Position
Unknown
AA seq
2153 aa
AA seq
DB search
MSETPSTGFSMIHPSSSEGQVRSPRHLRITHPVVAKRISFYKSGDPQFGGVRVVVNPRSF
KSFDALLDNLSRKVPLPFGVRNISTPQGRHSITRLEELEDGESYLCSHSRKVQPVDLDKA
RQRPRPWLSSHAPGAQAQGRPVVAAAPGLLRAPRRLVVFRNGDPKTRCAVLLSRRVTQSF
EAFLQHLTVVMKYPVAKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLP
ARLPGISHRVHRKGNAKSESRKMSTHMSSIPRSQIYSVSSDKTHTIDCCSDYSFAPENYL
ALEKHGPQNLSIYPSEDDIEKSIIFNQDGTMTVEMKVRFKIKEETIKWITTVNTPGLSNN
DEKSEIGCFPGRTDAPSPSFKFAACSMSADAKGNNQEASLAEEINTQMTVQEAETCSFAS
WENAALDTGNIHGTQNQVKHRFYRPPTPGPRRARQKKSVMGSVTLVSETEVQEKQFSYSE
EREGGKNKSEYHMFTHSCSKMSSVSNKPVFVQNNQNEQKESSLERKKESRLPKSRAIRAG
VIEITGQKMVKMSHNSGLSSATSENSTVEESTVNSVISDNKTDIKNFRTYNSTSDTFSPI
SADVTSSTSNNSGTDKSISEATVSIGSSTVTTRIDRLTDEFSQRGLTELPENKKQTVLPV
SRKKKKKVQPQVVNSRYQDGVIATKEISKKSKRINTEDRISEATVLKGPHSPLKGGTLCE
EDPHTSDMVIKSNNFYSKSILHPAISKNFHRNKLNTIQNPKVQGLLIKRKSRLLKRSSLG
TPKKREFGQGDKVLSHNESKYYKSTLKNQSSFHVFNHTEQTSKVFCDPESQAEIASGNLR
GMAKKSLFPKINDSHIIPKSPPKRKGVKLKSGAIVNKHHARARTNSLASLKKADFLEDIA
HNSVHNYIQRWLQNINPYPTLEPRMSAPLCKNERRVVNYNHGGSPGNHPHTNIAKGNDFV
LQSSKHMTKNASLTGDNLCKEAGESPIAKDDGEEPKDLDESQVGSVNGAHLVSLHEYGTL
SQPAVNDPKTKSQISAEKSGPEMSLVYQGINLAKKAQSVEVAIQVDPMEESTPKDLLSVL
LLRQFQAPVAGVHKPQNGVVQMPGSLADVSFPSSLCNSSTNLLLAWLLVLNLKGGITSFC
QGDAHKITSRSSETLALLEVLKHVAVTEEADDLKAAVANLVEATRRCPGPSEEEQGRVPV
GLPANCVAANIQRVSDCSGNERTLKISLERDFQGSANEVCDSEVCVPETTCSPCAVCTVD
DNYPPAEIYHPSEAISPSDGGVGDQTSLSKPCFLGQICGLPDAEFSQEAYAEEENIYEAA
CPTDETHIPTRVFNTVDILDSQENKYIDSLELSEELRRVDEVEEDLHVLADSEYNTGFNT
SASLRDVSNLSPCGLFSSKTDLEFDKQPSSSDEFENCSLKKFQDKNTYTSFDKEDSRTSE
EPGSVTNSMTSSEGNNVSELESFEELENQDTGIFNTKVNTEEQTTEESIQKEIEAGGNLQ
SIDMSSRSIIEEERRNGVISETTNTRQVTPPSLVFCYDSKQNTEKEISEGDAKRRAKMMV
RRIEAGSYSESSLDFKKCFKSPATSDWSDYRPDSESEQPHKTSSDDHNDSDDTAQEKEYN
KGFVKRAIEKLYGKAESMKPSSFPGSLHRSQVSPYNSVEFQCARKANSCVSEGRTFGFSE
QVSSSSPMSQEFQEERQGQRDVNGVGDSYHEADMADYGTIKQNDPNRVRRDKEEGKLIDK
GKWLLKENHLLRVSSENPGMYGNADTTSVDTLLDNNSNEVPYSHFGNLIPGPNMTELSSS
ELEELTQPLELRCNYFNLPHGSDCEPFGEDFADVENNTCAKERLPDRTEEKGNRQSERVC
TSVTHAFTSSSNKVHPVSDEIIKTQPLPGSSVTHSTLQEGDSLDKLYALCGQHCPILTVI
IQPLNEEDRGFAYRKDSDIENSWGFHLGMKIYPYWPQSNKNTFKNQDNHSIRRKEFVDNA
IDDPFDRLYFNKMFDLMDKRRKPKRIKFLGLEEESNLKKFQLYLKKSFCVNFLHKSLLVV
GDVNSEKQNPSKWTNGVFKTVDENNNLLNDRFQNSRTNLNQVVRENVNCRFFFEMLCQTC
LLDICQVETSLNVINRNILKIHYIFEGENLFIWEEENQLNLIDLESSNRQDDL
NT seq
6462 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagactccttccactggtttttccatgattcatccgagttcttctgaaggtcaa
gttcgttctcctcgccacttacgcatcactcatcctgttgtggccaaacggatcagcttc
tataagagcggagacccccaattcggtggagtcagagtggtggtcaaccctcgttccttt
aagagctttgatgctttgctggacaacttgtccaggaaggtgcccctgcctttcggggtg
aggaacatcagcacgccccagggaaggcacagcatcacgaggctggaggaactggaggac
ggtgagtcctacctgtgctcccacagtaggaaggtgcagcctgtggacctggacaaggct
cgccagcgcccccggccctggctcagcagccacgcccccggcgcgcaggcacagggtcgc
cctgtcgtggccgcggctccgggcttgctgcgcgcccccaggcgcctcgtggttttccgg
aatggcgatccaaagacgaggtgcgcggtccttctgagcaggagggtcacacagagcttc
gaggcctttctgcagcacttgacagtggtcatgaagtacccggtagccaagctgtatgcc
acggatggaaggaaggttcccagtctccaggcagtgatcctgagctctggagctgtggtg
gcagcaggaagggagccgtttaaaccagggaattatgacatccaaaagtacttgcttcct
gctagattaccaggaatctcccatcgtgtgcatcggaagggaaatgctaaatcagaaagc
agaaagatgagcacacatatgtcttcgatcccaagatcccagatttattctgtttcttct
gacaaaacacatactattgattgctgctcagactattcttttgctcctgaaaactacttg
gccttagaaaaacatggtcctcagaacttatcaatatatccttctgaagacgatattgag
aaatcaattatttttaatcaagatggtactatgacagttgagatgaaagttcgattcaag
ataaaagaagaaaccattaagtggataaccactgtcaatacacctggtctttctaataat
gatgaaaagagtgagataggttgttttcctggaagaacagatgctccatcacctagtttc
aagtttgcagcatgttcaatgtctgcagatgctaaaggcaataatcaagaggccagttta
gcagaagaaataaacactcaaatgacagttcaagaggctgaaacttgcagttttgccagt
tgggagaatgctgctttggacacaggtaacatccacggaactcagaatcaagtgaagcat
cgtttttatagaccacctacacctggaccaaggagagcaagacaaaagaaatcagtaatg
gggagtgtgaccctagtatctgaaacagaagttcaagagaaacagttttcctatagtgaa
gaaagggaaggtgggaaaaacaaatctgaatatcacatgttcacacattcttgcagtaaa
atgtcatccgtatccaacaaaccagtatttgttcagaacaatcagaatgagcagaaggag
tcatctttagaaagaaaaaaggaaagtagactccccaaatcaagagcgatacgtgctggt
gttatagaaattacaggtcagaagatggtaaagatgtcccataatagtggcttatcatca
gctacatcagagaactccactgtggaagaaagtacagttaatagtgtaatatcagacaac
aaaactgatatcaagaacttcagaacttacaatagcaccagtgatacgttcagtcccatt
tcagcagatgtaacgagctctacaagtaacaattctgggactgacaaaagtatttctgag
gccacggtttctatagggtcttctactgtcaccacaagaattgacagattaactgatgaa
ttttctcagcgtggtttaacagaactgccagaaaataaaaagcagactgtattacctgtt
tcccgaaaaaagaagaagaaagttcagccgcaagtagtaaattccaggtatcaagatggg
gtaattgcaaccaaagaaatctccaaaaagagtaagagaataaatacagaagatagaatt
tcagaggccaccgtgttgaaaggtccacacagtccccttaaaggagggacactttgtgag
gaagatccccatacaagtgatatggtaatcaaatcaaataatttttattccaaaagtatt
ctccatcccgctatttctaagaatttccatagaaataaattaaatactattcaaaaccct
aaggttcaaggacttttaatcaaaagaaaatccaggctactaaagagatcaagtttagga
acacctaaaaaaagagaatttggtcagggagataaagtactatcccataacgaatctaaa
tattacaaaagcactttaaaaaatcaaagttcatttcatgtgtttaatcacactgaacaa
acatcaaaagttttttgtgatccagagtctcaagcagaaatagcatctgggaatttgaga
ggaatggccaaaaagagtttatttccaaaaattaatgattcacacataattccaaaaagc
ccccccaaacgaaaaggggttaaattgaaatcaggtgctattgtaaataagcaccatgct
agagctaggaccaattctttagcttctttgaaaaaagctgatttccttgaggatattgcc
cataattcggttcataattatatacagagatggttgcagaacataaatccatatccaact
ttagaacctagaatgtcagctccactatgcaaaaatgaaaggagagtggtaaattataat
catggcggttctccaggaaatcatccccacacaaatattgcaaaaggaaatgattttgtc
ctgcaaagtagtaagcacatgactaaaaatgccagtttgacaggagataatctctgtaaa
gaggcaggtgaatctcctattgccaaagatgatggtgaagaacctaaagatcttgatgag
agtcaggttggatctgtgaatggcgcccacttggtttcactgcacgaatatggtacattg
tcacaaccagctgttaatgaccctaagactaaaagccagatatctgctgaaaagtcagga
ccagaaatgagccttgtttaccagggaataaacctagctaagaaagcacaaagtgtagag
gttgccattcaagtagatcctatggaagagagcactcccaaagacctcttatcagtcctg
ttgcttcgccaatttcaagctccagttgcaggtgtccacaagcctcagaatggagtcgtt
cagatgccaggttcacttgcagatgtttctttcccttcttccctgtgtaattcatccact
aatcttcttctagcttggctgttggtgctaaatctaaagggaggtatcactagcttctgt
caaggtgatgctcacaagatcaccagcagatcttcagagacacttgccttgttggaagtt
ctaaagcacgttgctgtcacagaggaagctgatgacttgaaggctgcggttgctaattta
gtggaagcaaccagacgttgccctggacccagcgaggaagaacagggtagggttcccgta
ggtctgcctgccaattgtgtcgcagccaacattcagagagtttctgactgcagtggaaat
gaaagaaccctgaaaatctctttggagagagattttcagggttctgccaatgaggtctgt
gattctgaggtctgtgttccagaaacgacttgctctccatgtgcagtgtgcactgtggat
gacaattaccctcctgcagaaatatatcaccccagcgaagctatttcccctagtgatggt
ggtgttggggatcagacctccttgagtaaaccttgtttcctaggacagatttgtgggctt
cctgatgctgagttttcccaggaagcttatgctgaagaggaaaatatctatgaggcagct
tgcccaactgatgagacccacattcccaccagagtcttcaatactgttgacattttagac
tcccaagaaaacaaatatattgattcattggaattaagcgaagagttgagaagagttgat
gaagttgaggaagacctacatgttttggcagactctgagtataatactggctttaataca
tcagcgtcacttcgggatgtcagtaatttaagcccttgtggccttttctcgagtaaaact
gatctagagtttgataagcaaccgagttcttcagatgaatttgaaaattgttcactaaag
aaatttcaggataaaaatacctacacttcctttgataaggaagactcaagaacttctgaa
gaaccgggttcagtcaccaacagcatgacatcaagtgaaggaaataatgtctcggaattg
gagtcatttgaagaattagaaaaccaagacactggtatctttaataccaaggtaaataca
gaagagcaaaccactgaagaatctatccaaaaagaaatagaggctggtggaaatttgcaa
tccatcgacatgtctagtaggagtattatagaagaagaaagaaggaatggtgtaatttct
gagaccaccaatacgaggcaggtgacacccccatctttggtgttttgttatgattctaag
caaaatactgaaaaggagattagtgaaggagatgctaagaggagagctaaaatgatggtg
aggcgcatagaagctggaagttattcagagtcctctcttgattttaaaaaatgcttcaaa
agcccggcaacttctgactggtcagactataggccagacagcgaaagcgagcagccacat
aaaacatccagcgatgaccacaatgacagtgatgacactgcccaagagaaagaatataat
aaagggtttgttaaaagggccatagaaaaactttatgggaaggcagagagtatgaaacca
tcttcttttccagggtctttgcacagatctcaagtttctccttacaattccgtggagttt
cagtgtgcaaggaaagcaaattcttgtgtttctgaaggtcggacatttggcttctctgaa
caggtgtctagtagttccccgatgtcgcaggaattccaggaggaaagacaaggtcaacgt
gatgttaatggtgtgggggacagttatcacgaggccgacatggcagactatggtactata
aaacaaaatgatcctaacagggtccgcagagacaaagaggaaggaaaactgattgacaaa
ggcaagtggcttctgaaagaaaatcatctgctaagggtgtcatctgaaaatcctggcatg
tatggcaatgcagacactacatcagtcgataccctccttgataataacagcaacgaggtg
ccatattcacattttggaaatttgatcccaggcccaaacatgactgaattatcctcttca
gagctggaggagctcactcaacctcttgaactgagatgcaattactttaacttgccacat
gggagcgactgtgaacccttcggtgaggattttgcagatgttgagaataacacctgtgcc
aaggagagactaccagatcgcacagaagagaagggtaatcgtcaatcagaaagagtatgc
acgtcagtcactcatgcctttacatcttctagtaacaaagttcaccctgtctctgatgag
atcattaaaacccaaccattacctggcagttctgtaactcacagtacacttcaggaaggt
gactctttggataaactctacgctctttgtggtcaacactgccccatactaactgtcatc
atccaacctttaaatgaggaagatcgaggatttgcttatcgaaaagattctgatattgaa
aattcctggggtttccatttagggatgaaaatatacccctattggccacagtcaaacaaa
aacacattcaagaatcaggataatcattcaattaggagaaaagaatttgttgataacgct
attgacgatccatttgataggctttatttcaataaaatgtttgacttgatggataaaaga
aggaaaccaaaaagaattaagttcttgggcttagaggaagaaagtaatttaaagaaattt
caattatatttaaagaaaagtttttgtgttaatttcttgcacaaatcattgttagttgtg
ggtgacgtaaattcagaaaaacaaaaccccagcaaatggacaaatggtgtttttaaaaca
gttgatgagaataacaacttattaaatgacagatttcagaactcaagaacaaatctcaac
caagtagtaagagaaaatgtcaactgtcgtttcttctttgaaatgctttgtcaaacctgc
ctgctagatatttgccaagttgagacatccttaaatgttattaatagaaatatattaaaa
atacattatatttttgagggtgaaaatcttttcatttgggaagaggaaaaccaattaaat
ttaattgatcttgaaagcagtaataggcaagatgatttataa
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