Marmota marmota marmota (Alpine marmot): 107142384
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Entry
107142384 CDS
T09644
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04140
Autophagy - animal
mmma04211
Longevity regulating pathway
mmma05010
Alzheimer disease
mmma05014
Amyotrophic lateral sclerosis
mmma05016
Huntington disease
mmma05017
Spinocerebellar ataxia
mmma05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107142384 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
107142384 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
107142384 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
107142384 (Rb1cc1)
05016 Huntington disease
107142384 (Rb1cc1)
05017 Spinocerebellar ataxia
107142384 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
107142384 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmma01009
]
107142384 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107142384 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
mmma03029
]
107142384 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
mmma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107142384 (Rb1cc1)
Membrane trafficking [BR:
mmma04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107142384 (Rb1cc1)
Mitochondrial biogenesis [BR:
mmma03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107142384 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
107142384
NCBI-ProteinID:
XP_015341268
Ensembl:
ENSMMMG00000000733
UniProt:
A0A8C5YK55
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNENEGSEKAEMKRSTEL
VLSPDMPRTTNTSLLTSFHKSVEHVAPDTTDDESGKEIRESCQSTVQQDETSVDTKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIRPFIVECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASVSQASPQSTSSPRIESATG
IATTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQGTN
TCGKEDFGDHASLNVQLEKCRVVAQDSHCSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
LEIRNIIEKVKCSLEITLKEKHQKELQSLKSEYEGKLNALIKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEIRELKQSREVVLED
LKKLHVENDEKIQLLRTELQCLEQSHLKELEDTLHVRHTQEFEKVMTDHRVSLEKLKEEN
QQRIVQIQESHAMIIQEKEQQLQELKVKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RTQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDILKAELAKVTSLHHQAFEIEKNLKEQIVELQSKLDSELSALEKQKEEKITQQ
EEKYEAIIQNLEKDKERLVMSHDQDREQLIQKLNCEKDEAIQAALKEFKLEREVVEKELL
EKVKHLENQIAQSPAIDSTREDSSSLVAELQEKLQVEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKLRKENIINDLSDKLKTTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFVPSAYVTTAPELYGACAPELPGETERSAMETTDEGRVDSAMETS
MMSVQENVPMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaatactggaactactctaacatttgatactgaactc
acagtacaaactgtggcagaccttaaacatgccattcaaagcaaatacaagattgctatt
cagcatcaggtacttgtggtcaatggaggagaatgcatggctgcagatcgaagagtatgc
acctacagcgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgaccgtgcacctgctattcctaaaacgaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcatactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgttctttttgcgaaggtcttgtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcataccaaaagctacttttcaaatttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttaaatgaaaatgaaggctcagaaaaggctgagatgaaaagatccactgaactg
gtgctttctcctgatatgcctagaacaactaacacatccttgttaacctcatttcacaag
tcagtggagcatgtagctccagataccacagacgatgaaagtggcaaagaaattagggaa
tcttgtcaaagtactgtccagcaagatgaaacttcagtagatactaaagacggtgatctg
cctttttttaatgtttctttgttagactggattaatgttcaagatagacctaacgatgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgatccaaagattattcgc
ccatttatagttgaatgccatcaaacaattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctatatgctctggaccagatgattgctagctgtggccgg
ctggttaatgaacagaaagagctcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgctggatattaaacagaagtgtaccactgccaaa
caagaactagcaaataatctgcatgtcagactaaagtggtgttgctttgtgatgctacat
gctgatcaagatggagagaaattgcaagctttgctccgtcttgtaatagagctgttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgtgaggagaaaaatgttcattaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcgattgtatgaagctgagaagtctaaaagggaatcctttgggaaatta
tttaggaagtcttttttaagaaaccgtctgtttcggggactagactcctggcctccttcc
ttttgtactcagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttcttcaatcattttgtccctcagaagttcagccattcctcagggtcccttta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaggca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgaatgaacaaaaggca
tctgtgagtcaggcatccccacagtctacttcttccccacggatagaaagtgcaacagga
attgcaactactacctcaccgagaactcctcctccacttgctgttcaggaccccttatgt
cctgcagtatgtcccttggaagaattatctccggatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactatacaccaagtttctttagacttg
gattcattggcagagagtcctgaatcagattttatgtctgcggtgaatgagtttgtgata
gaagaaaatttatcttctcctaatcctataagtgatcctcagagtccagagatgatggtg
gaatcactttattcatcagttatcaatgcaatagatagtagacgtatgcagggtacaaac
acatgtggtaaagaggattttggagatcatgcttctctgaatgttcaactggaaaaatgt
agagttgttgcccaggactctcactgcagtatacaaaccatcaaggaagacctttgccac
ttccgaacatttgtacaaaaagagcagtgtgacttctcaaattctttaaaatgtacagct
ttggaaataagaaacattattgaaaaagtaaaatgttccctggaaataacactaaaagaa
aaacatcaaaaagaactacagtctttaaaaagtgaatatgaaggtaagctcaatgcacta
ataaaggaaagtgaagaaaatgaaaacaaaataaaaaaattgaaaggagacctagtatgc
cttgaggaagttttacaaaataaagacaatgaatttgctttggttaaacatgaaaaagaa
gctgttatttgcctacagaatgaaaaggatcagaagttgttggagatggaaaatataatg
cacacacaaaattgtgaaatcagagagctgaaacaatcacgagaggtagttttagaagac
ttgaaaaagctccatgttgaaaatgatgagaagatacagttattgaggacagaacttcag
tgcttagaacaaagtcatctgaaagaattagaggacacactgcatgtcaggcatacacaa
gagtttgagaaagttatgacagaccaccgagtttctttggagaaattgaaagaagaaaat
caacaaagaattgttcagatacaagagtctcatgccatgattatccaggaaaaagaacag
caactgcaggaattaaaagtcaaggtttctgatttgtcagacatgagatgcaagttagag
gttgaacttgcattgaaggaagcagaaactgatgagataaaaattttgctggaagaaagc
agaacgcagcagaaggagaccttgaaatctctccttgaacaagagacagaaaatttgaga
acagaaataagtaaattaaaccaaaagattcaagataataatgaaaattatcaggtgggc
ttagctgagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacacgaagaagaatctgatattctgaaagccgaattagccaaagtaacatctttg
catcaccaagcattcgaaatagaaaaaaacttaaaagaacaaatagttgaactacagagt
aaattggactcagaattgagtgctcttgaaaaacaaaaagaagaaaaaatcacccaacaa
gaagagaaatatgaagctattatccagaaccttgagaaagacaaagagagattggtcatg
agccacgatcaagacagagaacagttaattcagaagcttaattgtgaaaaagatgaagct
attcaggctgccctgaaagaatttaaattggagagagaagttgttgagaaagagttatta
gaaaaagttaaacatcttgagaatcaaatagcacaaagtcctgctattgattctaccaga
gaggattcttcaagcttagttgctgaacttcaagaaaagcttcaggttgaaaaagctaag
tttctagaacaacttgaagagcaagaaaaaagaaaaaatgaagaaatgcaaaatgttcga
acatctttgattgctgaacaacaaaccaactttaatactgttttaacaagagaaaaattg
agaaaagaaaacataataaatgatcttagtgataagttaaaaactacaatgcagcaacaa
gaacgggataaagatttgatagagtcactttctgaagatcgagctcgtttgcttgaggaa
aagaaaaagcttgaagaagaagtcagtaagttgcgtagtagcagttttgttccttcagcg
tatgtaacaacagccccagaactttatggagcttgtgcccctgaactcccaggtgaaact
gaaaggtcagccatggaaacaacagatgaaggaagagtggattcagcaatggagacaagc
atgatgtctgttcaagaaaatgtccctatgctgtctgaagaaaaacagaggataatgctc
ttagaacgaacactgcagttgaaggaagaagaaaataagcgattaaatcaaagattgatg
tcacagagcatgtcttcagtatcttcacggcactctgaaaagatagcaattagagatttt
caggtgggagatttggtactcatcatcctagatgaacgtcatgacaattatgtattattt
actgttagtcctactttatattttctgcattcagagtctttgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaaa
ttttacagagtgaaagctgtgtcatggaataagaaagtatag
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integrated database retrieval system
