Marmota marmota marmota (Alpine marmot): 107142416
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Entry
107142416 CDS
T09644
Symbol
Vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmma01002
]
107142416 (Vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107142416 (Vcpip1)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107142416 (Vcpip1)
Peptidases and inhibitors [BR:
mmma01002
]
Cysteine peptidases
Family C64
107142416 (Vcpip1)
Ubiquitin system [BR:
mmma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
107142416 (Vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107142416
NCBI-ProteinID:
XP_015341310
Ensembl:
ENSMMMG00000002487
UniProt:
A0A8C5YNK2
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MSQPPPPPPLPPPPPPPEAPQTPSSLAAAAAAAPGGLSKRRDRRILSGSCPDPKCQARLF
FPASGTVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKV
MGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVG
YGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALR
ENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVL
HRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDGHLNKPICIAWSSSGRNHYIPLV
GIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEE
VFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELH
VPPEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVCSYDSVKDVLVPDYGLSNLTACN
WCHGTSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWG
GRVVRETVYWFQYESDPSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKN
PDDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQN
ITEQASAMQKRKTEKLKQEQKGQPRTVSPSAIRDGPSSAPATPTKAPYSPTTSKEKKIRI
TTNDGRQSMVTLKSSTTFYELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVP
LQHGDRITIEILKSKAEGGQSAAAHSAHTVKQEEIAVTSKLSSKELQEQADKEMYSLCLL
ATLMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRL
ELCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQL
HNVTAFQGKGHSLGTASTNPHLDPRARETSVVRKHNIGTDFSNSSTKTEPPVFTAAPSNS
ELIRIAPGVVTMRDSRQLDPDLVEAQRKKLQEMVSSIQASMDKHLRDQSTEQSPSDLPQR
KVEVVSSARSGSLQTSLPESFSLTGGTENLNTETTDSCVADALGAAFVTRSKAQKGSSVE
EPEEMDSQDAEMTNTTEPMDHS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgccgcctccgctgccgccgccacctcctccccctgaggctccg
cagactccgtcgtctttggcggcggcggcggcagctgctccgggggggctctcgaagcgg
agagaccggagaatcctttccgggagctgcccggatccgaagtgccaggcgcgtctgttc
ttcccggcctccggtactgtcagcatcgagtgtaccgagtgcggacagcggcacgagcag
caacagctgctgggggtggaggaggtgaccgatccggacgtagtgctgcacaacctgctg
cggaacgcgctgctcggggtgacgggagcacccaagaagaacacggaactggtaaaggtg
atgggcctttccaactaccactgtaaattgttgtcgcccatattagctcgctatggaatg
gacaaacagacaggccgggccaagcttctccgggatatgaaccagggtgaactgttcgat
tgcgctttactgggtgaccgcgctttccttatagaaccagagcacgttaacacggtgggc
tatggcaaggaccgctcgggaagccttctatatttgcatgacactcttgaggatatcaaa
cgagccaataaaagtcaggaatgcctcattccagtgcatgtggatggggatggacactgc
ctggtgcatgctgtgtctcgagctctagtaggccgggaactcttctggcatgccctgaga
gagaatctaaaacagcactttcagcaacacctggcccgatatcaagccctgtttcatgac
tttatcgatgccgctgagtgggaggacattatcaatgagtgtgatcctctgtttgtgcca
cctgagggtgttcccttaggtttgaggaacatccacatatttggccttgctaatgtgttg
catcgtcccataattctgttagattcccttagtggcatgagaagctctggtgattattca
gccacctttttgcctgggctcatacctgcagagaagtgcactggaagagatggtcatttg
aacaaaccaatctgtattgcatggagtagctctggtagaaaccattatattcccttggta
ggcataaaaggggctgctttacccaaactgcctatgaatttgcttcctaaagcatggggt
gtgcctcaggaccttattaaaaagtacatcaaactcgaggaagatggtggttgtgttatt
ggaggtgacagaagtttgcaagataaatacttacttaggcttgttgctgctatggaagaa
gtctttatggataaacatggtatccatcctagtttagttgctgatgtccatcagtatttc
tatagaaggacaggagtgataggagttcagcctgaagaggttacagcagctgctaaaaaa
gcagtaatggataatcgccttcacaaatgtttgctctgtggtgccctttctgaacttcat
gttcctccagagtggttggctccaggagggaaactgtataacttggcaaaaagtactcat
ggacagctgaggcctgacaaaaattatagctttcccttgaacaatttggtttgctcatat
gattcagtgaaagatgttctggtaccagactatgggttgagtaacctaacggcttgtaat
tggtgccatggcacatctgtgcgaagagtcagaggagatggatctattgtgtatttggat
ggagacagaactaattctaggtccactggtggcaaatgtggttgtggattcaaacacttt
tgggatggtaaagagtacgacaatctgccagaagctttccctatcactttggaatgggga
ggaagagtggtcagagaaacagtgtactggttccagtatgaaagtgatccatctctgaat
agtaatgtttatgacgttgcaatgaaacttgttaccaagcattttccaggtgaatttggg
agtgaaatcctagttcagaaagttgtccacaccatattgcatcagactgccaaaaagaat
cctgatgattatactcctgtaaatatagatggtgctcatgcccaaagagtcggagatgtg
caaggacaagaatcagaatctcagcttccaactaaaattattcttactggacagaaaaca
aaaactttgcacaaggaagaattaaatatgagtaaaactgaaagaactattcaacagaat
attacggaacaggcttctgcaatgcagaaacggaaaacagagaagttaaaacaagaacaa
aaggggcagcccagaactgtttctcccagtgccattcgtgatgggccatcctctgcacct
gccacccctaccaaggctccctattcacctacaacttccaaggagaagaagattcgaata
acaactaacgatggaagacagtccatggttacacttaagtcttcaacaaccttttatgaa
cttcaggaaagtatagccagagaattcaacattcctccttatttacagtgtattcgctat
ggctttcctcctaaagagttaatgccaccacaggcaggaatggaaaaggagccagttcct
ttacagcacggtgacagaatcacaatagagattctaaaaagcaaagcagaaggtggtcag
tctgctgcagcacactctgcccacactgtgaaacaagaagagattgctgttactagtaaa
ctgtcatctaaggaacttcaagagcaagctgacaaggagatgtactccttatgtctttta
gcaacattaatgggtgaagatgtatggtcttatgcaaagggacttcctcacatgtttcag
cagggtggcgtattctacaatattatgaagaaaaccatgggtatggctgatggcaagcat
tgtacttttccacatctacctggcaaaacttttgtctataatgcttctgaagatagactg
gagttgtgtgtggatgctgcaggacatttccccatcggtcctgatgttgaagatttagtt
aaagaggctgtaagtcaggttcgagcagaggcaactacaagaagtagagaatcaagtccc
tcacatgggcttttaaaactaggtagtggtggagtagtgaaaaagaaatctgagcaactt
cataatgtaactgcctttcagggaaaggggcattctctaggaactgcatccactaatcca
catcttgacccaagagctagggaaacttcagttgtaagaaagcataatatagggacagac
tttagtaatagttccactaaaacagagcctcctgtgttcacagctgctcctagtaacagt
gagcttattcgaatagctccaggagtagtaacaatgagagacagcaggcagcttgatcct
gatttggttgaggcccagcgaaaaaaattgcaggaaatggtttcttctattcaggcttca
atggacaaacacttgcgggatcaaagtacagaacagtcaccatctgatcttcctcaaaga
aaagtagaagttgtgagttctgcaaggtctgggagtcttcaaactagcttgcctgaatct
ttttctttaactggtggcactgaaaatttgaatacagaaacaactgatagctgtgtggca
gatgcactgggagcagcatttgtcacaaggtcaaaagcacaaaagggaagttccgtggag
gagcctgaagagatggatagtcaagatgctgagatgactaacacaactgagccaatggat
cactcttga
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integrated database retrieval system
