Marmota marmota marmota (Alpine marmot): 107142560
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Entry
107142560 CDS
T09644
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmma01009
]
107142560 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107142560 (Sh3rf1)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107142560 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
mmma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107142560 (Sh3rf1)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107142560 (Sh3rf1)
BRITE hierarchy
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
107142560
NCBI-ProteinID:
XP_015341495
Ensembl:
ENSMMMG00000014962
UniProt:
A0A8C5ZL20
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
EELPSNILLVRLLDGIKQRPWKPSPSGGSGTNCTNALRAQGSTVANCSAKDLQSSQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPMPGVDAGECTSAAAQSSTAPKHADTKKNTK
KRHSFTSLTMANKSSQAAQNRHSMEISPPVLISSSNPTAAARISELSGLSCSAPSQVHIS
TTGLIVTPPPSSPVTTGPSFTFPSDVPYPAALGTMNPPLPPPPLLAATVLASTPPGATAA
VAAAAAAAAAAGMGPRPVAGSTDQIAHLRPQTRPSVYVAIYPYTPRKEDELELRKGEMFL
VFERCQDGWFKGTSMHTSKIGVFPGNYVAPITRAVTNASQAKVPMSTAGQTSRGVTMVSP
STAGGPVQKLQGNGVAGTPSVVPTAVVSAAHIQTSPQTKVLLHMTGQMTVNQARNAVRTV
AAHNQERPTAAVTPIQVQNAACLGPSSVGLPHHSLASPQPLPPMAGSAAHAAAVGISRAG
APLACAAATSLTSPSITAASLEAEPSGRTVTILPGLPTSPDGSSSACGSGSASKPDKDSK
KEKKGLLKLLSGASTKRKPRVSPPASPTLEMELSGGELPLQGAVGPELPLGGGHGRAGSC
PVDGDGPVTAAPAGAALAQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVANDSRPVVCER
HRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatctgccttgttggatcttttggagtgtcctgtgtgtctagaacgcctggat
gcttctgcaaaagtcttgccttgccagcacacgttttgcaaacggtgtttgctggggata
gtaggttcccggaatgaactcagatgtcccgagtgcaggactcttgttggctctggtgtt
gaggagcttcccagtaacatcctgctggtcagacttctggatggcatcaagcagaggcct
tggaaacctagccctagtgggggcagtgggaccaactgcacaaacgcattaagggctcag
ggcagcactgtggctaattgtagcgcaaaagatctgcagagctcccagtgtggacagcag
cctcgggtgcaagcctggagccccccagtgaggggtatacctcagttaccatgtgccaaa
gcattatataactacgaaggaaaggagcctggagaccttaaattcagcaaaggtgacatc
atcattttgcgacgacaagttgatgaaaactggtaccatggggaagtcaatggaatccat
ggctttttccccaccaactttgtgcagattattaaaccattacctcagcccccacctcag
tgcaaagcactttatgactttgaagtgaaagacaaggaagcggacaaagattgccttcca
ttcgcaaaggatgatgttctgactgtgatccgcagagtggatgaaaactgggctgaagga
atgttggcagacaaaataggaatatttccgatttcctacgttgagtttaactcggctgct
aagcagctgatagaatgggacaagcctcccatgccaggagttgatgctggagaatgtacc
tcagcagcagcccagagcagcactgccccaaagcacgccgacaccaagaagaacaccaaa
aagcggcactccttcacttccctcaccatggcaaacaagtcctcccaggccgcccagaac
cgccactccatggagatcagccctcctgtgctcatcagctccagcaaccccacagctgcc
gcgaggatcagcgaactgtctgggctctcctgcagtgccccctctcaggttcatataagt
accaccgggttaattgtgaccccacccccaagcagcccagtgacaactggcccctcattc
actttcccgtcagatgtcccctacccagctgcccttggaaccatgaatcctccccttcca
ccaccccctctcctggctgccactgtcctcgcctccacaccaccaggcgctactgctgct
gttgctgctgctgctgctgccgccgctgctgctggaatgggacccaggcctgtggcagga
tccactgaccagattgcacatttacggcctcagactcgcccaagtgtgtatgtggctatc
tacccatacactccccggaaagaggatgaactagaactgagaaaaggggagatgttttta
gtgtttgagcgttgccaggatggctggttcaaagggacatcaatgcatactagcaagatc
ggggttttccctggcaattacgtggcacccatcacgagggcggtgacaaatgcttcccag
gctaaagtccctatgtctactgcgggtcagacaagtcgaggggtgaccatggtcagtccc
tccactgcaggagggcctgtccagaagctccagggaaatggtgtggccgggacacccagt
gtcgtccccacggctgtggtatcagcagctcacatccagacaagtcctcagacgaaggtc
ctgttgcacatgactgggcaaatgacagtcaaccaggcccgcaacgcagtgaggacagtt
gcagcacataaccaagaacgccccacggcagcggtgacgcccatccaggtacagaatgcc
gcctgccttgggccttcatctgtgggcctgccccaccattcactggcctccccgcagcct
ctgcctccaatggcaggctccgctgcccatgctgctgctgtcggtatcagtcgagccggt
gccccactggcctgtgctgcggccacttcgctgacctccccgagcatcaccgctgcctct
ctggaagccgagcccagtggacggacagtgaccattctccctggacttcccacgtctcca
gatggctcttcatcagcttgtgggagcggttcagcaagcaaaccagacaaggacagcaag
aaagaaaaaaaggggttattgaagttgctgtctggtgcctccaccaaacggaagccccga
gtatcccctccagcatcgcccaccctggaaatggagctgagtggtggcgagttgcccctg
cagggagctgtgggtcctgagctaccccttgggggaggccacggtcgagcaggctcctgc
cccgtggacggggatggcccagtcaccgcggcaccagcaggggcagccctggcccaggat
gctttccatcggaagaccagctccctggactccgcagtgcccatcgcaccacctcctcgt
caggcatgttcctccctgggtcctgttgcaaatgactctaggcctgttgtttgtgaaagg
caccgggtggtggtttcctatcctcctcagagtgaggcagaacttgaacttaaagaagga
gatattgtgtttgttcataaaaaacgagaggatggctggttcaaaggcacgttgcaacgc
aatgggaaaactggccttttcccaggaagctttgtggaaaacatctga
DBGET
integrated database retrieval system
