KEGG   Marmota marmota marmota (Alpine marmot): 107142833
Entry
107142833         CDS       T09644                                 
Symbol
Polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03020  RNA polymerase
mmma03420  Nucleotide excision repair
mmma04623  Cytosolic DNA-sensing pathway
mmma05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107142833 (Polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107142833 (Polr2k)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    107142833 (Polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmma03021]
    107142833 (Polr2k)
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107142833 (Polr2k)
Transcription machinery [BR:mmma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     107142833 (Polr2k)
  RNA polymerase III system
   RNA polymerase III
     107142833 (Polr2k)
  RNA polymerase I system
   RNA polymerase I
     107142833 (Polr2k)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107142833 (Polr2k)
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DmmA-like_C MCM_OB A2L_zn_ribbon DUF5816 Cytochrome_C7 HypA Zn_ribbon_13
Other DBs
NCBI-GeneID: 107142833
NCBI-ProteinID: XP_015341823
Ensembl: ENSMMMG00000016111
UniProt: A0A8C5ZQT1 A0AAJ7AKT3
LinkDB
Position
Unknown
AA seq 99 aa
MRRKRQRHLFTSFAGAGTWLRRPDDRCSVWKRGEKSAWCVGMDTQKDVQPPKQQPMIYIC
GECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 300 nt   +upstreamnt  +downstreamnt
atgaggcggaagaggcagagacacctctttacgtcattcgccggcgccggaacttggctg
cgacgccccgacgatagatgttctgtttggaaacgcggggaaaagtctgcgtggtgtgta
ggaatggacactcagaaggacgttcaacccccaaagcagcagccaatgatctatatctgt
ggagaatgtcacacagaaaatgaaataaaatccagggatccaatcagatgcagagaatgt
ggatacagaataatgtacaagaaaagaactaaaagattggtggtttttgatgctcgatga

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