Marmota marmota marmota (Alpine marmot): 107143293
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Entry
107143293 CDS
T09644
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107143293 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107143293 (Dhx36)
03012 Translation factors [BR:
mmma03012
]
107143293 (Dhx36)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107143293 (Dhx36)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107143293 (Dhx36)
Translation factors [BR:
mmma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107143293 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
AAA_23
NPHP3_N
DUF6782
AAA_34
Motif
Other DBs
NCBI-GeneID:
107143293
NCBI-ProteinID:
XP_015342413
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MDERREEQIVQLLNSVQAKNDKDSEAEISWFAPEDHGYGTEVSDEIKPSSEKKLDSQEKK
VKNQDKKTFRIRDKSYIDQDSEYLLQENEPDGTLDQKLLEDLQKKKTDPRYIEMQHFREK
LPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRR
ISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLS
SVSHIVLDEIHERNLQSDVLMTVIKDLLQFRSDLKVILMSATLNAEKFSEYFGNCPMIHI
PGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDY
IRELRRRYSASTVDVIEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHD
LLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYV
IDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY
QLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIKHLMELNALDKLEEL
TPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRK
ELAKQTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL
GAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGL
VALHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQE
TIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWKDTKSRDCAVLSAITDL
IKTQEKATPRNFPPRFQDGYYS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgacgagaagagcaaattgtgcagctgctaaattctgtccaagcaaagaat
gataaagattcagaagcagagatatcctggtttgcgcctgaggatcatggatatggtact
gaagtttctgatgagataaaaccaagctcagagaagaaacttgacagccaggaaaagaaa
gtgaaaaaccaagataaaaagacatttaggatcagggacaaatcatacattgaccaagat
tctgagtatcttttacaagaaaatgaaccagatggaaccttagaccaaaagttactggag
gatttacaaaagaaaaaaactgaccctcgttatattgaaatgcagcatttcagggaaaag
ctgccttcatatggaatgcaaaaggagttggtaaatttaattgataatcatcaagtaaca
gtaataagtggtgaaactggttgtggaaaaaccactcaagttactcagttcattttggat
aactacattgaaagaggaaaaggatctgcatgcaggatagtttgtactcagccaagaaga
attagtgccatttcagttgcggagagagtggctgcagaaagggcagaatcttgtggcaat
ggaaacagcactggataccaaattcgtctccagagtcggttgccaaggaaacagggttct
atcttatactgtacaacaggaatcatccttcagtggctccagtcagacccgcatttatcc
agtgttagtcatattgtacttgatgaaatccatgaaagaaatctacagtcagatgtttta
atgactgtgattaaagatcttctccagtttcgatctgacctaaaagtaatattgatgagt
gcaacactgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatata
cctggttttacttttccggttgtagaatatcttttggaagatattattgaaaaaataaga
tatgttccagaacaaaaagaacagagatcccagtttaagaggggtttcatgcaaggacat
gtaaatagacaagaaaaagaagaaaaagaagcaatctataaagaacgatggccagattat
atcagggaactgcgaagaaggtattctgcaagtactgtagatgttatagaaatgatggat
gatgataaagttgatctgaatttgattgctgcccttattcggtacattgttttggaagaa
gaggatggtgcaatactggtctttctaccaggctgggacaacatcagcacattacatgat
ctcttgatgtcccaagtgatgtttaaatcagataagtttattattatacctttgcattcg
ctgatgcctacagtaaaccagacacaggtatttaaaagaactcctcctggtgttcggaag
atagtaattgctaccaacattgcagagactagcattaccatagatgacgtagtttatgtg
atagatggaggaaaaattaaagagacacactttgacactcagaacaacatcagcacaatg
tctgccgagtgggttagtaaagctaatgccaaacagaggaaaggtcgagctggaagagtt
caacctgggcattgctatcacctgtataatggcctgagagcaagtcttctggatgattat
caactaccagagattctgagaacacctttggaagaactttgtttgcagataaagatttta
agactaggtggaattgcttattttctgagtaggttaatggatccaccatcaaatgaggca
gtgttactgtccataaaacacctgatggaactgaatgctctggataaactagaagaactg
acacctcttggagtccacttagcccggttaccagttgagccacatattgggaagatgatt
ctttttggcgctctcttctgctgcttagacccagtgctcaccattgctgctagtctcagc
ttcaaagatccctttgtcattccattgggtaaagaaaagattgcagatgcaagaagaaag
gaattggcaaagcaaactagaagtgatcacctgaccgttgtgaatgcatttgagggctgg
gaagaagctaggcggcgtggttttagatatgagaaggactactgctgggagtattttctg
tcctcaaacacactgcagatgctgcataacatgaaaggacagtttgctgagcatcttctt
ggagctggatttgtaagcagtagaaatcctaaagacccagaatctaatataaattcagat
aatgagaagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatt
cgactaaatttgggtaaaaaaagaaaaatggtaaaagtttacacaaaaacagatggcctg
gttgctcttcatcctaaatctgttaatgtggagcaaacagattttcactacaactggctt
atctatcacctgaagatgagaacaagtagtatatacttgtatgactgcacagaagtttcc
ccatactgtctcttgttctttggaggtgatatttccatccagaaggataatgaccaggaa
accattgctgtagatgaatggatcgtgtttcaatctccagcaagaattgcccatctcgtt
aaggaattaagaaaggagctggatatccttctacaagagaagattgaaagccctcatcct
gtagactggaaggacacgaaatccagagactgtgctgtcctgtcagctattacagactta
atcaaaacacaggaaaaggcaactcccaggaactttccaccacgcttccaggatggatat
tacagctga
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