Marmota marmota marmota (Alpine marmot): 107143323
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Entry
107143323 CDS
T09644
Symbol
Hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107143323 (Hps3)
Membrane trafficking [BR:
mmma04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
107143323 (Hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
107143323
NCBI-ProteinID:
XP_048650080
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MTSGNTISGSVSSCTGNKTSQLETDDFVICQKPMELLGEKSEQSGLLVTLESTGWADEST
KYSHVQHLLYRRFTPDISFYSPSDEIKLHSLHLLPIYHTGSLTSDGKNLSQEKELLSLFC
FFSLPHVGYLYMVVKSVELMSIYQYPEKSQQAVLTPQFLHVITSNNLQCFTVRCSAAAAR
EEDPYMDTTLKACPPVSLDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAVPERKESPK
RLLSRKDTSVKNRIPPAVEAGWNLYIVNTVSPMQLYKEMVDYSNTYKTIKTQSCIHLLSE
AHLLVRAALMDAGQLEPGEKAELLEAFKESCGHLGDCYSRLDTQHSHLALPYYKMSGLTM
AEVLARVDWAVDSEPQKYEKGLIFYINHSLYENLDEELSEELAAKVVQMFHVTEPKQLPH
VLCSPSMKNINPLTALSYLNKLDTYGFASILVTLTKAAVALKMGNLDMYRDEMKSYSEMK
LACGFILEPRLLIQQRKGQMVPTQLAAHLREMQPGLLVAAVLGLQKNNKIGIEEADSFFK
MLCDQDEDMIPQLLVDFWEAQLVACLPDVVLQELCFKLTSQYIWRLSKRQPPDTTPLQTS
EDLINACSHFGLIYPWVDVLISSDSLADKNYKEDLSKLQSLICGPSFDIASIIPFLEPLS
EDTVAGLSVHVLCRTRLREYEQCLDTLLERCPQAVIPYANHELKEENRTLWWKKLLPELC
QRIKCGGEKYQLYLTSLKEVLSIVAVELELRDFLNVLPEDGTAAFFLPYLLYCSRKKSLT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaggtaacaccatctctggctcagtttcctcatgcactggcaataaaacttca
cagcttgagacagatgattttgtgatctgccaaaagcccatggaacttcttggtgagaag
agtgagcagtctgggctcttggtcacgctggagtccacgggatgggctgatgaaagcaca
aaatactcccacgttcagcacctgctctacagacgttttactcctgatatctcgttctac
agcccgtctgatgaaatcaagttgcactcccttcacctgctccccatttaccacacaggt
tcgcttacttctgatggaaaaaatttgtctcaggaaaaagagttgctgagtctcttttgc
tttttctccctacctcatgtgggctatctctacatggttgtcaagtctgttgaattaatg
tcaatctaccaataccctgagaagtctcagcaggccgtgctcacgccacagtttttacac
gtcatcacaagcaacaacctacagtgcttcacggtgcggtgcagcgcagcggccgctcgc
gaggaggacccgtacatggacaccaccctgaaggcttgcccacctgtcagtttggatgtc
tgtgctttaagaatacagcttttcataggcttgaaagccatctgtcactttaaaaaccac
atcatactcttgaccaaagcagagcctgaggctgttcctgagagaaaagagtcacccaag
aggcttctttctaggaaggataccagtgttaagaacagaatacctcccgcagtcgaggct
gggtggaatttgtacattgtgaataccgtctcgccaatgcagctctacaaagaaatggta
gactacagcaacacctacaagaccataaaaacccagagctgcatccacctcctcagcgag
gctcatctgttggtgagggcagccctgatggatgccggccagctagaacctggagagaaa
gcagagcttttggaagcatttaaagaaagctgtgggcacctcggagactgttacagcaga
ctggacacccagcattcccacctggccttgccgtactataagatgtctggtttgaccatg
gctgaagtcttggcacgtgtggactgggcagtggacagtgaaccacagaaatacgagaag
ggattaatcttttatattaatcattcactttatgaaaacctggatgaagaactaagtgaa
gaattagcagcaaaagtggttcagatgtttcacgtgactgagccgaagcaactgccccat
gttctctgcagcccttccatgaagaatattaatcctttaactgccttgagctacctgaac
aagttggatacttatggatttgcctcaatcctagtgacactgaccaaagcagcagtggct
ctgaaaatgggaaatctcgacatgtacagagatgaaatgaaaagctattcggagatgaag
ttggcgtgtggcttcattctggaacctcggctgctgattcaacagaggaagggacagatg
gttccaacccagcttgcagcgcacctgagagagatgcagcctggcttgctcgtggctgca
gtcctgggcttgcagaagaacaacaaaatcggaattgaagaggctgattctttctttaag
atgctctgtgatcaggacgaagatatgattcctcagctcttggtagacttctgggaagct
caattagtggcctgtctcccagacgtggtacttcaggaactctgtttcaagctcacatca
cagtacatctggagattgtctaagaggcagcctcctgacactaccccgttgcaaacatca
gaggatctgataaatgcctgcagtcactttggcttaatctacccgtgggttgatgtcttg
atatcatctgattccttagctgataaaaattacaaagaagacctttcaaaattacaatct
cttatctgtggtccttcatttgacatagcttccatcattcccttcttggagccactctcg
gaagacactgttgctggcctcagtgtccacgttctgtgtcgtactcgcctgagagagtat
gagcagtgcttggacacgctgctggagagatgcccgcaggcagtcattccatacgctaat
cacgaactgaaagaagagaaccggactctgtggtggaaaaaactgctgcctgagctttgt
cagagaataaaatgtggtggagagaagtatcaactttacctgacatcactgaaagaagtg
ctttccatcgtcgctgtggaactggagctcagggatttcttgaacgtcctcccagaagat
ggcactgctgcattcttcttgccctatcttctttactgcagtcgcaaaaaatcactgact
tga
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