KEGG   Marmota marmota marmota (Alpine marmot): 107143338
Entry
107143338         CDS       T09644                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107143338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmma03041]
    107143338
Spliceosome [BR:mmma03041]
 Complex A
  U2 snRNP components
   U2 related factors
    107143338
 Complex B
    107143338
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 SET_assoc RRM_7
Other DBs
NCBI-GeneID: 107143338
NCBI-ProteinID: XP_015342465
Ensembl: ENSMMMG00000017089
LinkDB
Position
Unknown
AA seq 1029 aa
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDW
AIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATP
IDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWE
LFDQHEESEEEENQNQEEESEDEDDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEK
RAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKK
DKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERS
HKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRS
HKKSKKNKH
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcggatctcagaaggccagttcaaagaccagatcatcagat
gttcattcatctggctcttcagatgcacatatggatgcatctggaccctcagatagtgat
atgccaagtcggacgcggcctaagagtccaagaaaacataattataggaatgaaagtgcc
cgtgagagcctttgtgattctcctcatcagaatctctcaagacctcttctagaaaacaaa
cttaaagcattcagcattggaaaaatgagcacagctaagcgaactttaagtaagaaggaa
caagaggaattaaagaaaaaggaggatgaaaaggcagctgcggagatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacatttgtgcgagggggtgtt
gttaatgcagctaaagaagaacatgaaacagatgaaaaaagaggtaaaatctataagcca
tcttcaagatttgcagatcaaaaaaatcctccaaatcagtcgtccaatgaaagaccacca
tctcttcttgtaatagaaaccaaaaaacctccactgaagaaaggggagaaagaaaagaaa
aaaagcaacttggaacttttcaaagaagaattaaaacaaattcaagaagagcgtgatgag
aggcataaaacaaaaggcaggttaagtcgattcgagccgcctcagtcagattctgatggt
cagcgtcgttctatggacgcgccttccaggagaaatcgatcatctggtgttcttgatgat
tatgcaccaggctcacatgatgtaggcgatccaagtactactaatttataccttggaaac
attaatccacagatgaatgaagaaatgctgtgccaagaatttggaagatttggaccatta
gctagtgtgaaaattatgtggcctagaactgatgaagaaagagcaagagaaagaaattgt
ggctttgtggcctttatgaatagaagagatgctgaaagagctttaaaaaatttaaatgga
aaaatgattatgtcttttgaaatgaagttaggttggggtaaagctgtacctattcctcca
catccaatatacattccgccttctatgatggaacatacacttcccccacctccatccgga
ctgccttttaatgcgcagcctagagaacggttaaaaaaccccaatgctcccatgttacca
ccacctaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgccctgatacatcgaatgatagagtttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagaaatcaacaatcctatgttcagg
ttcttatttgaaaaccagacacctgcccatgtttactacaggtggaagctttattccatt
ctgcagggagattctccaactaaatggcggacagaagattttcgtatgttcaaaaatgga
tctttttggaggccaccaccattaaatccataccttcatggaatgtcagaagaacaagaa
acagaagcttttgtagaggaacctagtaagaagggagcactcaaggaagaacagagggac
aaattagaagaaatcttacggggattaactccaagaaaaaatgatattggagatgcaatg
gtcttctgtcttaataatgctgaagctgctgaagaaatagtggattgcattactgaatca
ttgtctatcttaaagacacctcttcctaaaaagattgccagattatatttggtttctgat
gttttgtacaactcttcagccaaagttgccaatgcttcatattatagaaaattttttgaa
acaaagttatgtcagatattttcagacctcaatgctacctatcgtacaattcaaggccat
ttgcagtctgaaaactttaagcaacgggtaatgacctgcttcagagcatgggaagattgg
gcaatttatccagaaccatttttgatcaaactacagaatattttcttaggacttgtaaat
attattgaagaaaaggaaaccgaggatgtaccagatgatcttgatggtgctcccattgaa
gaagagcttgatggtgcacctctagaagacgtggatggaattcccattgatgctactccg
attgatgatcttgatggagttcctataaaaagtcttgatgatgatctggatggagtgcct
ttggatgcaactgaagactcaaagaagaatgagcctatatttaaagttgccccgtcaaaa
tgggaagctgtagatgaatctgaattggaagcacaagctgtaacaacttctaagtgggag
ttatttgaccagcacgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagt
gaagatgaagatgatacccaaagttccaaatctgaagagcatcacttgtactctaatcca
atcaaagaagaaatgaccgagtccaagttctctaaatactctgaaatgagtgaggaaaaa
cgagctaagcttcgtgagattgagctcaaagttatgaagtttcaggatgaattagagtct
ggaaaaagacctaaaaaaccaggccaaagtttccaagagcaagtagaacactacagagat
aaacttcttcaacgagagaaagagaaagaattagaaagagaacgagaaagagataagaag
gataaagaaaagttggaatctagatccaaagacaagaaggaaaaagatgagtgtactcca
acaaggaaagaaaggaaaaggcgacatagtacatcccccagcccatctcgcagtagcagt
ggtagacgagtgaaatccccatcaccaaaatcggagcgttcagagcgttcagaaagatct
cataaagaaagctcccggtccaggtcatctcacaaagattctcctagggatgttagcaaa
aaagccaaaagatcaccatctgggtcaaggacacctaaaaggtctaggcgatcacgatct
agatcccctaaaaaatcagggaagaaatccagatcccagtcccgatctccacacaggtct
cataaaaagtcaaagaaaaacaaacactga

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