Marmota marmota marmota (Alpine marmot): 107143386
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Entry
107143386 CDS
T09644
Symbol
Topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107143386 (Topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmma03032
]
107143386 (Topbp1)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107143386 (Topbp1)
DNA replication proteins [BR:
mmma03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107143386 (Topbp1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107143386 (Topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
PIR2-like_helical
Motif
Other DBs
NCBI-GeneID:
107143386
NCBI-ProteinID:
XP_015342530
Ensembl:
ENSMMMG00000018894
UniProt:
A0A8C5ZXY6
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
MSRNDKEPFFVKFLKSSENSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGAVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTVSCTSLDKEK
RDEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITRYTDMDMEDFKCPIFLGCIICVTGLCGLDRRAVQQLTIKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESIYKMEPRPETKSMPDTSTPT
GQVHTIDSRTLSDVSHISNINGSCINESICSSVLNSKLESSLDSLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRP
HVVGAKWLLECFSKGYMLPEEPYIHANYQPVEIPVSDQPESKTALSKKNNSSFSKKDSAP
NEKHEQADEDLLSQYVNNNSSVVEAKMTEAAESAVGPCNGSTHVEPFNDSTHISLQEENQ
SSVTHCLPDNSTITEEGLFSQKSFLVLGFSSENECNIGNIIREHAGKIVSLPSRIVADYA
VVPLLGCKVEATVGEVVTNTWLVTCIDYQTLIDPRSNPLFTPVPVMSGVTPLEDCVISFS
QCVGAEKDSLIFLANHLGASVQEFFVRKSNAKKGMFASTHLILKEPVGSKYEAAKKWNLP
AVTIAWLLETARMGKRADESHFLIENSPEEEQRLETKITNGENPNPDTPTHPCTHVETHR
RTAITPLDMNRFQSKAFRAVISQHAGQLSASPAVEQPLQKEPSLHLDTPSKFLSKDKLFK
PSFDVKDALAALETPGGPSQQKRKLSTPLSEVIVRNLKLALANSSRNSVALSASPQLKDA
QSKKEDTPKPLHKVVVYVSKKLNKKQNELNGIAASLGADYRWSFDDTVTHFIYQGRPNDS
NREYKSIKERGIHIVSEHWLLECAQEYKRLPESLYPHTYNPKMSLDISTVQDGRLCNSRV
PSTVSAAEDEEPDHLPVEENGTENMTTSNKESALSDGNEKNDSKGVLTQTLEMRENFQKQ
LQEIMSATSIVKPQGQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQIVPDVN
TEPSQNEQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIKNLEDSSFQEPLRGSEI
AEQAVSDPGNGCGTEAPKHPNSEELETPTKDSHLIPTPQAPSIAFPLANPPVAPHPGEKI
VTTEESREELKKYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPSCTHIVVGQPLRN
EKYLASVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGISVQQRRLALAAM
RWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEAT
HLFSDLNKQKPDDSVINIAEAAAQNVYCLRTEYIADYLMQESLPPVENYCLPGAVAFLQN
NKEPAPLSPQKRRAAVEKSKVKRPRIH
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagaaaattcc
aaatgtttttttaaagctcttgagtctataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaagataaaggaaaatgacagatcactttatatttgt
gacccttttagtggtgctgttttcgatcaccttaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgcatgcatcaccagcgatgtgtcccaagagctgaacatcct
gtttataatatggtaatgtctgatgtaactgtatcttgtacaagcctggataaagaaaaa
agggatgaagttcataagtatgtacaaatgatgggtggacgagtatacagagaccttaat
atatcagtaactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgca
aatctgaagaaacctattttgcttccttcttggataaaaacactttgggaaaagtcacaa
gagaaaaaaataactagatacactgatatggacatggaagatttcaagtgccctattttt
cttggttgcataatctgtgtgacaggcttgtgtggcttagacaggagggcagtccagcaa
ctcaccattaagcatggaggccaatacatgggacagttgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccgaaaggtcagaaatatgaatgtgccaagagatggaatgtacat
tgtgtcaccacgcaatggttttttgacagcgttgagaaaggtttttgtcaggacgaatct
atatacaagatggaacctagaccagaaacaaagagtatgcctgacacttcaactcccact
ggccaagtccatacaattgatagccgtactctttcagatgttagccatatttcaaacata
aatggaagttgcataaatgaatcaatatgcagttcagttcttaatagcaaattggagtct
tcgcttgacagtctagaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgccggatatatctttgtggttttagtggaagaaagctagataaactgagaaga
cttattaacagtggaggtggagttcgttttaatcaacttaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttggaataaatcggcccacaggccg
catgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaa
gaaccatatattcatgctaactaccagccagtagaaattccagtttcagatcagcctgaa
agcaaaacagctctttcaaaaaagaacaacagtagcttttccaagaaagactctgctcct
aatgaaaagcatgaacaagctgatgaagatctgctctctcaatatgtaaataataactcc
tcagtagttgaagctaaaatgactgaagctgcagagtctgcagttgggccctgtaatggt
tctactcatgttgagccctttaatgattctactcacatttctctgcaagaagaaaaccag
tcttctgtcactcattgcctccctgacaattctacgattactgaagaaggcttatttagc
caaaaaagtttccttgttttgggttttagtagtgaaaatgaatgtaatattggaaatatc
ataagagaacatgctggaaagattgtatcccttccgagcagaattgtggctgattatgct
gtggttcctctgctgggatgtaaagtagaagcaactgtgggagaagtggtcacaaataca
tggctggttacttgtatagactatcagactttaattgatccaaggtcaaatcctctcttc
acaccagtcccagtaatgtcaggagtgactcctttagaggattgtgttatttcattcagc
caatgtgttggagcagaaaaagattctttgatattcttagcaaatcaccttggagcaagc
gttcaagaattctttgttcgcaaatccaatgcaaagaaaggcatgtttgccagtacacat
cttatattaaaagagcctgttggttctaaatatgaagctgcaaagaagtggaatttgcca
gcagttactatagcttggcttttggagactgctagaatgggaaagagagcagatgaaagc
cactttctgattgaaaattcacctgaagaagaacaaagattggaaactaaaataacaaat
ggagagaatccaaatccagatactcctacacatccttgtacacatgtggaaactcacaga
agaacagccattacaccactggatatgaaccgctttcagagcaaagctttccgtgctgtg
atctcacaacatgctgggcagctctcggcctcaccagcagtagaacagccactgcagaag
gagccctcattgcacctggacacaccatcaaaatttctgtccaaagacaaactcttcaag
ccttcctttgatgtaaaggatgcacttgcagccttggaaactccaggaggtcccagccaa
cagaaaaggaaactgagtacaccactctcagaagtcattgtcagaaacttgaaactcgct
ttggcaaatagttctcgcaattcagttgctctttctgccagccctcaactgaaggatgcc
caatcaaagaaggaagacactccaaaaccccttcacaaagttgtggtgtatgttagtaaa
aagctcaataagaagcagaatgaactaaatggaattgccgcctccctaggagcagattac
aggtggagttttgatgacacggtaactcatttcatctatcaaggccgaccaaatgacagt
aatcgagagtataagtctataaaagaaagaggaatacacattgtttctgagcactggctt
ttagaatgtgcccaggaatataagcgtcttcctgaatctctttatccacatacttataat
cccaaaatgagccttgatatcagtaccgtgcaagatggcagactctgtaacagccgagtg
ccctcaactgtctctgcagcagaggatgaagagccagatcatttgcctgtagaagaaaat
ggtacagaaaacatgaccaccagtaataaagaatcagcactgtcagatggaaatgaaaag
aatgattctaaaggagttctcacacagaccttggagatgagagaaaatttccaaaagcaa
ctgcaggagatcatgtctgccacctccatcgtgaaaccccagggacagaggacttccctt
tcaagaagtggctgtaacagtgcctcctcaacccctgacagcacgcgctccgctcgaagt
ggacgaagtagagtcctagaggctctgaggcagtctcgacagatagtacctgatgtcaat
acagagccctcccaaaatgaacagatcatttgggatgaccctacggcaagagaggagaga
gcaaggcttgccagcaatttgcaatggcctagttgtcccacacagtactctgagcttcag
gttgacattaaaaatttggaggattcttcttttcaagagcctttacgtggttcagaaatt
gctgaacaggctgtcagtgatcctggaaatggatgtgggactgaagcccccaaacacccc
aactctgaagaactggaaactccaacaaaagacagtcacctgatccctactcctcaagcc
ccaagcatcgccttccctctagccaatccacctgtggccccacaccctggagaaaagatt
gtaacgacagaggagagtcgtgaagaattaaaaaaatacatatttcagctgtcgtctctg
aatcctcaggaacgtattgattattgtcatctgattgaaaaactaggtgggctggtgata
gagaagcagtgctttgatcccagctgtacacacattgttgtggggcagccacttcgaaat
gagaagtatttggcctccgtggcagctgggaagtgggtgcttcatcgctcctacctggaa
gcatgcaggactgcaggacacttcgtgcaggaagaagactatgaatggggaagtagttcc
atactcgatgttttgactggcatcagtgtacagcaacggagactagcactcgcagcaatg
agatggaggaaaaaaatccagcaaagacaagaatcgggcatcgtggagggagcattcagt
ggttggaaggttatcttacatgttgaccaatcccgagaagcaggattcaagcgtcttctt
cagtctggaggagcaaaggtgctacctggtcattctgttcctttatttaaagaggccaca
catctcttttctgacttaaataaacagaaaccggatgactcagtaattaatatagcagaa
gctgctgcccagaatgtgtactgcttaagaacagaatacattgctgattatcttatgcag
gaatctcttcctcctgtggagaattactgtctaccaggagctgttgcatttcttcagaat
aataaggagcctgcaccactgtcaccacagaagaggagagctgctgtggagaagagcaag
gtcaaacgacctcgaatacactag
DBGET
integrated database retrieval system
