Marmota marmota marmota (Alpine marmot): 107143588
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Entry
107143588 CDS
T09644
Symbol
Lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107143588 (Lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
107143588 (Lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107143588 (Lsm2)
03041 Spliceosome [BR:
mmma03041
]
107143588 (Lsm2)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107143588 (Lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
107143588 (Lsm2)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107143588 (Lsm2)
Complex C
U2 snRNP components
107143588 (Lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107143588
NCBI-ProteinID:
XP_015342805
Ensembl:
ENSMMMG00000010414
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLKAVCFIPSAVLVKEEETPTNICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFI
RGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggctgtgtgttttatccccagcgctgtgttggttaaagaagaggaaacacct
acaaacatctgtggaaccctccattctgtggatcagtatctcaacatcaaactaactgac
atcagtgttacagaccctgagaaatatcctcacatgttatcagtgaagaactgcttcatc
cggggctcagtggtccgttatgtgcagttgccagcagacgaagtggatacacagttgcta
caggatgcagcaaggaaggaagccctgcagcagaagcagtga
DBGET
integrated database retrieval system
