Marmota marmota marmota (Alpine marmot): 107143636
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Entry
107143636 CDS
T09644
Symbol
Trerf1
Name
(RefSeq) transcriptional-regulating factor 1
KO
K26583
transcriptional-regulating factor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107143636 (Trerf1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
107143636 (Trerf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Zn_SUZ12
zf-C2H2_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
107143636
NCBI-ProteinID:
XP_048661684
Ensembl:
ENSMMMG00000024512
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHSGLNHNYGNTVTGGGMDAAQASPISPHFPQD
TRDGLGLPVGSKNLGQIDTSRQGGWGGHAGPGNHVQLRGNLANSNMMWGAPAQVEPADGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEPPAPAIPSRYQQVAQQAHPGFTGGLSKPAFQVGQHPSQGHLYYDYQQSL
VQMPMQGGQPLQTPQMLSQHMQQMQQHQYYPQQQQQQAGQQRISMQEIQQQQQQQQQQQQ
QQQQQQQTRPPQPQPQPQSQQQLPLQQRQSSMQIPQYYQPQPMMQHLQEQQQQPVHLQPP
SYHRDPHQYTPEQAHAVQLIHLGSMPQYYYQEPQQPYSHPLYQQSHLPQHQQREDSQLKT
YSSDRQAPAMLSSHGDLGPPDTGMGDPASSDLTRVSSALPHRPLLSPSGIHLNNMGPQHQ
QPSPSAMWPQMHLPDGRAQPGSPESSGQPKGVFGEQFDAKSKLTCSICLKEFKSLPALNG
HMRSHGGMRASPSLKQEEGEKAQPPPPQPPLPPPPPPPPQLPPEAESLTPMVMPVSVPVK
LLPPKPSSQGFTNSVVAVPSARDKPASSVSDDEMPVLVRMTLSPPHSPQGAAPHAPAVSC
CSAPPAWSGDIPLLSWRWGYYTPPPMLSPVRQGSGLFSNVLIAGHGPGAHPQLPLTPLTP
TPRVLLCRSNSIDGSNMTITPGPGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTHKA
TLVWKPWPELENQDLQQRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLL
LQKPVRLKCHPLANYHYAGTDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEY
YYTWKKIMRLGRKHRTRLAEIIDDCVTSEEEEELEEEEEDLEEDKKSTKEEESEPPKSPE
PPPVPVLAPTEGPPLQALGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKTRG
AVPSGKQKPGGTQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTH
RQQEEQQRQKAQKAAFAAEMAATIERTTGSVGTPGLLPLDQLGLIKPIKDADTLDDDVVQ
QLGGVMEEAEVVDTDLLLDDQDSVLLQGDAEL
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcagcaactgtacaagaccaaccacgtggcccatggtggtgagaaccttttc
taccaacagccaccccttggtgtccacagtgggctgaaccacaactatgggaatacagtc
acagggggtggaatggatgctgctcaggcctcgcccatctccccccacttccctcaagat
actcgggatggtctgggcctacctgttggttccaaaaaccttggccaaatagatacctcg
aggcagggagggtggggaggccatgcagggcctggaaaccatgtccagctacgtggcaac
ctggccaactcaaatatgatgtggggggcaccagcccaggtggagcccgctgatggctac
cagtatacctactcccaagccagtgagatccggacccagaagctcaccagtggtgtctta
cacaagctggactctttcacccaggtgttcgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtgatggatggagcccctgacagtgcc
ctgcgccagctgctgtctcagaagcccatggagcccccagcaccggctataccttcccgc
taccagcaggtggcccagcaggctcaccctggtttcactgggggattgtccaaaccagcc
tttcaggtcgggcagcacccgtcccaagggcacctgtattatgactaccagcagtcactg
gttcagatgccaatgcagggaggccagccgctgcaaactccacagatgctgtcacagcac
atgcaacagatgcagcagcaccagtattatccacagcagcaacagcagcaagcagggcag
cagcggatctccatgcaagaaatacagcagcagcagcagcagcagcaacagcagcagcag
cagcagcagcaacagcaacagactcgcccaccacagcctcagccacagccgcagtcgcaa
cagcagctaccactgcagcagcggcagagttcaatgcagatacctcagtattaccagccc
caacccatgatgcaacacttgcaagaacagcagcagcaaccagtgcatctgcagccccct
tcttaccacagggaccctcatcagtacaccccggagcaggcacacgctgttcagctgatt
catctgggctccatgccccagtactactaccaagagccccagcaaccctacagccacccc
ctctaccagcaaagccacctgccccagcaccagcagcgtgaggacagtcaactgaagact
tattctagtgacaggcaggccccggccatgctgagctcccacggggatctggggcctcct
gatacaggaatgggagacccagcaagttcggacctgacccgggttagcagtgccctcccc
catcgaccactcctctcccccagtgggatccacctcaacaacatggggcctcagcatcag
cagccgtctcccagtgccatgtggccccagatgcacctacctgatgggagagcccagccg
gggtcccctgagtcaagtggccaacccaaaggagtgtttggggaacagtttgatgccaag
agcaagctgacgtgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccacggtggaatgagggcgtcccccagcctcaaacaggaggaaggagag
aaggcccagccgcctccgccccagccgccactgccgcctccgcctccaccgccaccgcag
ctccctcccgaggcagaaagcctcacgcctatggtcatgcccgtgtctgtccctgtcaag
cttctcccgcccaagcccagctctcaggggttcaccaacagcgtcgttgccgtcccctcc
gccagagacaagccagccagctcggtgtcggacgacgagatgcctgtgctcgtgaggatg
accctctctccccctcactccccccagggggctgccccccacgcgcctgctgtgagttgc
tgctctgccccacctgcctggagtggggacatccctttgctttcttggagatggggatac
tacacgccccctcccatgctgagcccagtgcgccagggctcggggctcttcagcaacgtc
ctcatcgcggggcacggccctggcgcccacccgcagctgcccctcacgcccctgacgccc
accccgcgggtgctgctgtgccgttccaatagcattgatggcagcaacatgacgatcacc
ccagggcctggagagcagactgtggatgttgaaccacgcatcaacattggcttgagattc
caagcagagatcccagaactccaggatgtctctgccctggcccaggacacacacaaggcc
acactggtatggaagccctggccagagctggaaaaccaggacctccagcagcgagtggag
aatcttctgaatttgtgctgttcaagtgcattgccaggtggagggaccaattctgaattt
gctttgcactctctctttgaggccaaaggtgatgtgatggctgctctggaaatgctgctg
ctgcagaagccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggtacg
gacaagtggacctccctagaaagaaaactgtttaataaagcactagccacttacagcaaa
gactttatttttgtacagaagatggtgaagtcgaagacggtggctcagtgcgtggagtac
tactatacgtggaagaagataatgcggttagggcggaaacaccggacacgactggcagaa
atcatcgacgactgtgtgacaagtgaagaagaagaagagttagaggaagaggaggaagac
ctggaggaagacaagaaatccacaaaagaagaagagagtgaacccccaaagtccccggag
ccaccaccagtccctgtcctggctcccaccgagggaccacccctgcaggcccttggccag
ccctccggctccttcatctgtgaaatgcccaactgtggggctgtgttcagctcccgacag
gcactgaatggccatgcccgcatccatggtggcaccaaccaggtgaccaagactcgaggt
gctgtcccctctgggaagcagaagcctggcggcacccagagtgggtattgctctgtgaag
agttcaccttctcacagcaccaccagtggcgagacagaccccaccaccatcttcccctgc
aaggagtgtggcaaagtcttcttcaagatcaaaagccgaaatgcacacatgaaaactcac
aggcaacaggaggagcagcagaggcaaaaggctcagaaggcagctttcgcagcagaaatg
gcagccacaatcgagaggactacggggtcggtggggacgccagggctcctgcctctggac
cagctgggtctgatcaagcccatcaaggatgcagataccctcgatgacgacgtggtccag
cagctgggaggcgtcatggaagaggctgaggtcgtggacaccgatcttctcttagatgac
caagattcagttttgcttcagggtgacgcggaactctaa
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