Marmota marmota marmota (Alpine marmot): 107143795
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Entry
107143795 CDS
T09644
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04612
Antigen processing and presentation
mmma05163
Human cytomegalovirus infection
mmma05168
Herpes simplex virus 1 infection
mmma05169
Epstein-Barr virus infection
mmma05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
107143795
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
107143795
05168 Herpes simplex virus 1 infection
107143795
05163 Human cytomegalovirus infection
107143795
05169 Epstein-Barr virus infection
107143795
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Ortholog
Paralog
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Motif
Pfam:
C1-set
ig
Ig_3
Med5
Motif
Other DBs
NCBI-GeneID:
107143795
NCBI-ProteinID:
XP_015343032
Ensembl:
ENSMMMG00000024240
UniProt:
A0A8C6AAP8
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MKPLSLLLAVTLGLATTVSAGPSAIECWFVEDVGGGGLAKRPAALLLRQGPEGPPPRPDL
DPKLYLKVDDPTGTLQAAFRRYPRGVPAPHCEISRYIPLPASANWASGLTPERSCPRALD
GAWLTVSMSSSVLSLSSLLRLQPEPQQEPVLITVATVVLTVLTHTPAPRIRLGQDAILDL
SFAYMPPTLEATASLAPSPPPFGLEWRRQHLGKGHLLLAATPGLGGQMPAAREGAVAFAA
WDDDDPWGPWTGNGTFWLPAVRPFQEGTYLATVHLPYLQGQVSLELTMHKPPKVSLSPAP
LVWAAPGEAPPELLCLVSHFYPSEGLEVEWELRGGSESGSQKAEGQRWLSSLRHHSDGSV
SLSGHLQLPPITAEQHGARYICRVHHSSLPASGRSAEVTVEVAGFSGPSLEDGVGLFLSA
FLLLGLFKVLGWVAAYLIIHKDSKEKKSQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccctgtccctgctccttgctgtgactttgggcctggcgaccaccgtctcagca
ggaccatctgcgatcgagtgttggttcgtggaggatgtgggcgggggcggcctggccaag
agacccgccgcactgcttctgcgccagggacccgagggaccgccaccccggccagacctc
gaccctaagctctacctcaaagtggacgaccccacgggcaccctgcaggctgccttcagg
aggtacccccggggcgtccccgcaccacactgcgagataagccgatacatcccgctccct
gcctctgcaaattgggccagcggcctgaccccggagcggagctgcccgcgggccctggac
ggggcttggctgaccgtcagcatgtccagctcggttcttagcctctccagcctcttgcga
ctccagccagagcctcagcaggagcctgttcttatcaccgtggcaacagtggtgctgact
gtcctcacccacacccctgccccccgaatccgactgggacaagatgctatattggacttg
agcttcgcctacatgcccccaaccctcgaggctactgcatctctggccccaagtccccct
ccctttgggctggagtggcgacgacagcacctgggtaaggggcacctgctcctggctgca
actcctgggctgggtgggcagatgccagcagcccgagaaggagcagtggcgtttgctgct
tgggatgatgatgatccatggggcccatggaccgggaatgggaccttctggctgcctgcc
gtgcgaccctttcaggagggcacctatctggccactgtacacctgccatacctgcaagga
caggtctccctggagcttactatgcacaagccccccaaagtgtccctgtcaccagcaccc
cttgtttgggctgccccaggggaggcacctccagagttgctgtgccttgtgtcccacttc
tacccttccgagggcctggaggtagagtgggagctccggggtggctcagagagtggatct
cagaaggccgaggggcagaggtggctctcctctctgcgccaccattcagatggctctgtc
agtctctctggacacctgcagctgcccccaatcactgctgagcagcatggggctcggtac
atctgtcgtgtccaccactccagcctgcccgcctcggggcgcagtgctgaggtcactgtg
gaggtggcaggtttctctgggccctcccttgaggatggcgtagggctcttcctgtctgcc
ttcctcctcctgggactcttcaaggtgctgggctgggtcgctgcctacctgatcattcat
aaggattccaaggagaagaaatcacagtga
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