KEGG   Marmota marmota marmota (Alpine marmot): 107143964
Entry
107143964         CDS       T09644                                 
Symbol
Cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107143964 (Cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmma03041]
    107143964 (Cdc5l)
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107143964 (Cdc5l)
Spliceosome [BR:mmma03041]
 Complex B
  Other components
   Prp19 complex
    107143964 (Cdc5l)
 Complex C
   Prp19-CDC5 complex
    107143964 (Cdc5l)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107143964 (Cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 107143964
NCBI-ProteinID: XP_015343300
Ensembl: ENSMMMG00000024584
UniProt: A0A8C6AE95
LinkDB
Position
Unknown
AA seq 802 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDP
RKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQSLDADFR
KLRQQDLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGA
EGLTPRSGTTPKPVTNSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGL
LGLPAPKNDFEIVLPENAEKELEDREVDDTYIEDAADVDARKQAIREAERVKEMKRMHKA
VQKDLPRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKG
KTVVFGTNNSEHIAYLEHNPYEKFSKEELKKAQDVLVQEMEVVKQGMSHGELSSEAYNQV
WEECYSQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKIL
LGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQDR
EKELQHRYADLLLEKETLQSKF
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgccacgaattatgatcaaagggggcgtgtggaggaacaccgaggatgaaattctgaaa
gcagcagtaatgaaatatgggaaaaaccagtggtctaggattgcctcattgctgcataga
aaatcagcaaagcagtgcaaagccagatggtatgaatggctggatccaagcattaagaaa
acagaatggtccagagaagaagaggaaaaactcttgcacttggctaagttgatgccaact
cagtggaggactattgctccaataattggaagaacagcagcccagtgcttggaacactat
gaatttctcctggacaaaactgcccaaagagacaatgaagaggaaacaacagatgatcca
cgaaaacttaaacctggagaaatagatccaaatccagaaacaaaaccagcacggcctgat
ccaattgatatggatgaggatgaacttgagatgctttctgaagctagagcccgcctggct
aatactcagggaaagaaggccaagaggaaagcaagagagaaacaattggaagaagcaagg
cgtcttgctgcccttcaaaaaagaagagaacttcgagcagctggcatagaaattcagaag
aaaagaaaaaagaagagaggagttgattataatgctgaaatcccatttgaaaaaaagcct
gctcttggtttttatgatacttctgaggaaaactaccagtcccttgatgcagattttagg
aaattaagacaacaggatcttgatggggagctaagatctgaaaaagaaggaagagataga
aaaaaagacaaacagcatttgaaaaggaaaaaagaatctgatttgccatcagctattctt
caaactagtggtgtttctgaatttactaaaaagagaagcaaactagttcttcctgctcct
cagatttcagatgcagaacttcaggaagttgtaaaagtaggccaagcaagtgaaattgca
cgtcagactgctgaggaatctggcataacaaactctgcttccagtactcttttgtctgag
tacaatgtcaccaacaatagcattgctcttagaacaccccgaacgccagcttcccaggac
agaattctgcaggaagcccagaacctcatggccttgaccaatgtggacaccccgttaaaa
ggtggacttaataccccattgcatgagagtgacttctcaggcgtgactccacagcggcaa
gttgtacagactccaaacacagttctttctaccccattcaggactccttctaatggagct
gaagggctgactcctcgaagtggaacaacccctaaaccagttactaattctaccccaggt
agaactcctcttagagacaaattaaacattaatccagaagatggaatggcagactatagt
gatccctcttatgtgaaacagatggaaagagaatctcgtgaacatctccgattagggttg
ttgggacttcctgccccaaagaatgattttgaaattgttttacctgaaaatgctgagaag
gagctcgaagaccgggaagtggatgatacttatattgaagatgctgctgacgtggatgct
cgaaagcaggccatacgagaggcagagcgggtaaaggaaatgaaacgaatgcacaaagct
gtccagaaagatttgccaagaccatctgaagtaaatgaaactattctaagacctttaaat
gtagaaccacctctaacagatttacagaaaagtgaagaactaatcaaaaaagaaatgatt
acaatgcttcattatgaccttcttcatcacccctatgagccatctggaaataaaaaagga
aaaactgttgtatttggtactaacaattctgagcacattgcttatctggaacataaccct
tatgaaaagttctccaaagaagagctgaaaaaggcccaagatgttctggtgcaggagatg
gaagtggtaaaacaaggaatgagtcatggagaactctccagtgaagcttataaccaggtg
tgggaagaatgctacagtcaagttttatatcttcctgggcagagccgctatacacgggct
aatctagctagcaaaaaggacagaattgaatcacttgaaaagaggcttgagataaacagg
ggtcacatgacgacggaagctaagagagctgcaaaaatggaaaagaagatgaaaattttg
cttggaggttaccagtctcgtgctatggggctcatgaaacagttgaatgacttgtgggac
caaattgagcaggctcacttagagttacgcacttttgaagaactcaaaaaacatgaagat
tctgctattccccggaggctagagtgcctaaaagaagatgtgcagcgacaacaggacaga
gagaaagagcttcagcatagatatgctgatttactgctggagaaggagactttacagtca
aaattctga

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