Marmota marmota marmota (Alpine marmot): 107144147
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Entry
107144147 CDS
T09644
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
107144147 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
Other domain-containing proteins
Patched domain-containing proteins
107144147 (Ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
107144147
NCBI-ProteinID:
XP_048652334
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MELKVIIQFYSLVYFLGQAIQIYKKMATPPIDSSTSSGRIFKWTWLLMLHAAVTKIQVPR
PGFNYTFAHICILNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHLKDGRAVYNG
HQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLFQKYNSKVKM
YPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLGLLGLVTISL
ATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVYA
DSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTG
YIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEETAEGEEANTYESHLLVCFLKR
YYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIEYTTAQQKYF
SNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNVSTGLTKKNF
TDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREELYDLLETLR
RLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVADSLINVWITL
TVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKDFTRTKWVKN
ALEIHGVAILQSYLCYIVGLIPLAAVPSNLTCTLFRCLFLIAFVTFFHCFAILPVILTFL
PPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagttatcatccagttttactccctggtttacttcctgggtcaagctatc
cagatatataaaaagatggcaacaccacctattgacagcagtaccagtagtggcagaatc
ttcaaatggacatggcttttaatgttgcatgctgctgtgaccaagatccaggttccaagg
cctggttttaattacacgtttgcccacatatgtatcctgaataatgataagacttgcatc
gtggatgacatagtacacgtcctggaagagttaaagaatgctcgggctacaaatcggacc
aattttgctatcacatacccgatcacccacttaaaggacggtagggccgtatacaatggg
caccagcttgggggcgtcactgtgcacagcaaggatcgggtgaaatctgcagaggccatt
cagctcacctattacctgcagtcaatcaacagtctcaatgacatggtggctgagaggtgg
gagtccagcttctgcgacactgtcaaactgttccagaaatacaacagtaaagtcaaaatg
tacccttacacatcctcgtcactgagggaagatttccagaagaccagccgtgtgtcagaa
cgttacctggtcaccagcctgatcctggtagtcaccatggccatcctctgctgctctatg
caggactgcgtccgcagcaaaccctggctaggcctgcttgggttggtaaccataagccta
gccactctcactgcagctgggatcatcaatcttactggtgggaaatacaattccaccttc
ctgggagtccctttcgtcatgctaggtcatggactatatgggacttttgaaatgttatcc
tcctggaggaaaactagagaagaccaacatgttaaggagcgaactgcagcagtctatgca
gactccatgctctccttttctctcaccactgccatgtacctggtcacctttggcataggg
gccagtcctttcacaaacattgaggcagccaggattttctgctgcaactcctgtattgca
atcttcttcaactacctctatgtactctcgttttatggttccagcctggtgttcactggc
tacatagaaaacaattaccagcatagtatcttctgtagaaaagtcccaaagcctgaggta
ttgcaggagaagccggcatggtacaggtttctcctgacagccagattcagtgaagaaaca
gctgaaggagaggaagcgaacacttacgagagtcacctattggtatgtttcctcaaacgc
tattactgtgactggataaccaacacctatgtcaagccttttgtagttctcttttacctt
atttatatttcctttgccttaatgggctatctgcaggtcagcgaagggtcagaccttagt
aacatcgtagcaactgcgacacaaaccattgagtatactactgcccagcaaaagtacttt
agcaactacagtcctgtgattgggttttacatatatgagtccatagaatactggaacact
agtgtccaagaagacgttctagaatataccaaggggtttgtgcggatatcctggtttgaa
agctacttaaattaccttcggaaactcaatgtatccactggcttgactaagaaaaatttc
acagacatgttgaggaattccttcttgaaagccccccaattttcgcattttcaagaggac
atcatcttctctaaaaagtacaatgatgaagttgatgttgtggcctccagaatgtttttg
gtggccaagaccatggaaacaaacagagaagaactctatgatctcttggagaccctgagg
agactttcagtcacctccaaagtgaagttcatcgtctttaatccatcttttgtgtacatg
gatcgatatgcctcctctctgggagcccccctgcacaactcctgcatcagtgctttgttc
ctgctcttcttctcggcattcctggtggcagattctctgattaatgtctggataactcta
acagttgtgtctgtggagtttggagtgataggtttcatgacattatggaaggtagaactg
gactgcatttccgtgctatgcttaatctatggaattaactacacaattgacaattgtgct
ccactgttatccacatttgttctgggcaaggatttcacaagaactaaatgggtaaaaaat
gccctagaaatacatggggtagctattttacagagttacctctgctatattgttggtctg
attcctcttgcagctgtgccttcaaatctgacctgtacactgttcaggtgcttgttttta
atagcatttgtcaccttctttcactgctttgccattttacctgtgatactgactttcctg
ccaccctctaagaaaaaaaggaaagagaagaaaaatcctgaaaaccgggaggaaattgag
tgtgtagaaatggtggatatcgatagtacccgagtggttgaccaaattacaacagtgtga
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