Marmota marmota marmota (Alpine marmot): 107144200
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Entry
107144200 CDS
T09644
Symbol
Ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04622
RIG-I-like receptor signaling pathway
mmma05161
Hepatitis B
mmma05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107144200 (Ddx3x)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107144200 (Ddx3x)
09172 Infectious disease: viral
05161 Hepatitis B
107144200 (Ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107144200 (Ddx3x)
03041 Spliceosome [BR:
mmma03041
]
107144200 (Ddx3x)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107144200 (Ddx3x)
Enzymes [BR:
mmma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107144200 (Ddx3x)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107144200 (Ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
107144200 (Ddx3x)
Spliceosome [BR:
mmma03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107144200 (Ddx3x)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107144200 (Ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107144200
NCBI-ProteinID:
XP_048652431
Ensembl:
ENSMMMG00000010865
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDG
PGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADI
GQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVE
QDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPD
KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ
FRSGKSPILVATAVCIILSFSFKLSMFKCFLLNGPYITEVIFQVAARGLDISNVKHVINF
DLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAF
EHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGG
GGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaattatcatgggaaatattgagcttactcgttatactcgcccaactccagtg
caaaagcatgctattcctattatcaaagagaaaagagacttgatggcttgtgcccaaaca
gggtctggaaaaactgcagcgtttcttttgcccatcttgagtcagatctattcagatggt
ccaggagaggctttacgggccatgaaggagaacggaaggtatgggcgccgcaaacaatac
ccaatctccttggtattggcaccaaccagagagctggcagtacagatttatgaggaagcc
cgaaaattctcataccgatcaagggttcgaccttgtgtggtttatggtggtgctgatata
ggtcagcagattcgagacttagagcgtgggtgccacttgttagtagctactccaggacgt
cttgtggacatgatggaaagaggaaagattggattagacttctgcaaatacttggtgtta
gatgaagctgaccggatgttggatatggggtttgaacctcagatccgtagaatagttgaa
caagatactatgcctccaaaaggtgtccgccacactatgatgtttagtgctacttttcct
aaggaaatacagatgctagctcgtgatttcttggatgagtatatctttttggccgtagga
agagttggctctacttctgagaatatcacacagaaagtagtctgggtggaagaaccagac
aaacggtcatttctgcttgacctcctaaatgcaacaggcaaggattcactgaccttagtg
tttgtggagactaaaaaaggtgcagattctctggaggatttcttatatcatgaaggatat
gcttgcaccagtatccatggagaccgttctcaaagagatagggaagaggctcttcatcag
ttccgctcaggaaaaagcccaattctagtggctacggcagtatgtataatactatcattt
tcattcaagctcagcatgtttaaatgctttcttttaaatgggccatatataacagaagtt
atttttcaggtagcagcaagaggattagatatttcaaatgtgaaacatgttatcaatttt
gatttaccaagtgatattgaggaatatgtgcatcgcataggccgtacaggacgtgtagga
aaccttggccttgccacctcattctttaacgagagaaacataaatattactaaggatttg
ttggatcttcttgttgaagctaaacaagaagtgccgtcttggttagaaaacatggctttt
gaacaccactacaagggtagcagtcgtggacgttctaagagcagtagattcagtggaggg
tttggtgccagagactaccgacaaagcagcggtgccagcagttccagcttcagcagcagc
cgtgcgagcagcagtcgcagcggcggaggcggccatggtagcagcagaggatttggtgga
ggtggctatggaggcttttacaacagtgatggatatggaggaaattataactcccagggg
gttgactggtggggtaactga
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