Marmota marmota marmota (Alpine marmot): 107144673
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Entry
107144673 CDS
T09644
Symbol
Amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04137
Mitophagy - animal
mmma04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107144673 (Amfr)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107144673 (Amfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107144673 (Amfr)
Enzymes [BR:
mmma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
107144673 (Amfr)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107144673 (Amfr)
Multi subunit type E3
ERAD complex
107144673 (Amfr)
LMBR1L-GP78-UBAC2 complex
107144673 (Amfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
SVIP
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
107144673
NCBI-ProteinID:
XP_015343966
Ensembl:
ENSMMMG00000011247
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRAREDHQ
GENLDENLVPVAATEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRTEGIRPALN
SPMERPSTDQEEGEASPQTECVPLDLSPRLEENLDFSEVDMESNEVEDFEARGSRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEDVSASESFLPSEGTSSDPVTLRRRMLAAAAER
RLQKQQTS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggctaagcttatccagtgtattgtgtttggccctctgcgagtgagtgagaga
cagcacctcaaagacaagttttggaattttattttctacaagttcattttcatttttggt
gtgctgaatgtccagactgtggaagaggtggtcatgtggtgcctgtggtttgctggactt
gtttttctgcatctgatggttcagctctgcaaggaccgatttgaatatctttccttttct
cccactacaccgatgagtagccatgggcgagtcctgtctctgttgattgctatgctgctt
tcctgctgcgggttagcagttgtctgctgtgtcacaggctacacccatggaatgcacacc
ttggctttcatggctgcagagtctcttcttgtgacagtgaggacagcccatgtgatttta
cgatatgtaattcacctctgggacctcaaccatgaagggacctgggaaggcaagggaacc
tacgtctattataccgattttgtcatggagctcactcttctgtccctggacctcatgcac
cacattcacatgttgttatttggcaacatctggttatccatggccagcctggtcatcttt
atgcagctgcgttacctgtttcatgaggtgcagcgtcgaatccgtcggcacaagaactat
ctgcgtgtggtcgggaatatggaagccaggtttgcagttgcaactccagaggaactggct
gtcaacaatgacgactgtgccatctgctgggactccatgcaggctgcaaggaaactgccc
tgcggacatcttttccacaactcctgtcttcgttcctggctagaacaagatacatcctgt
ccaacatgcagaatgtctcttaatattgctgacaataatcgtgccagagaagaccatcaa
ggagagaacttggatgagaatttggttcccgtagcagccactgaaggcagacctcgctta
aaccaacacaatcacttcttccactttgatgggtcccggattgcaagttggctgccaagt
ttttcagtggaagtaatgcacaccaccaacattcttggcattacacaggcgagcaactct
cagctgaatgcaatggctcatcagattcaggagatgttcccccaggttccataccacctg
gtgctgcaggacctgcagctgacgcgctcagtggaaattacaacagacaacatcttagag
ggacggattcaagtaccttttcccacacagcggacagaaggcatcagacctgctttgaac
agtcctatggaaaggcccagcactgaccaggaggagggagaagcttcccctcagactgag
tgtgtgccattggacctcagtcctcgcctggaggagaacttggacttcagtgaagtggat
atggagtccaatgaggtggaagactttgaggcccgggggagccgcttctccaagtctgct
gatgagagacagcgcatgttggtccagcgcaaggacgacctcctgcagcaggctcggaaa
cgattcttgaataaaagttctgaagatgtctcggcctcagagagctttctcccctcagaa
ggcacgtcctctgaccccgtgaccctgcgtcgaaggatgctggccgctgctgccgagcgg
aggcttcagaagcagcagacctcctag
DBGET
integrated database retrieval system