KEGG   Marmota marmota marmota (Alpine marmot): 107144673
Entry
107144673         CDS       T09644                                 
Symbol
Amfr
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04137  Mitophagy - animal
mmma04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107144673 (Amfr)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    107144673 (Amfr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmma04121]
    107144673 (Amfr)
Enzymes [BR:mmma01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     107144673 (Amfr)
Ubiquitin system [BR:mmma04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107144673 (Amfr)
  Multi subunit type E3
   ERAD complex
    107144673 (Amfr)
   LMBR1L-GP78-UBAC2 complex
    107144673 (Amfr)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-ANAPC11 zf-rbx1 zf-RING_UBOX zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 SVIP zf_RING_Vps8 zf-RING_Vps41
Other DBs
NCBI-GeneID: 107144673
NCBI-ProteinID: XP_015343966
Ensembl: ENSMMMG00000011247
LinkDB
Position
Unknown
AA seq 548 aa
MLVAKLIQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGL
VFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHT
LAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMH
HIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELA
VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRAREDHQ
GENLDENLVPVAATEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNS
QLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRTEGIRPALN
SPMERPSTDQEEGEASPQTECVPLDLSPRLEENLDFSEVDMESNEVEDFEARGSRFSKSA
DERQRMLVQRKDDLLQQARKRFLNKSSEDVSASESFLPSEGTSSDPVTLRRRMLAAAAER
RLQKQQTS
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgttggtggctaagcttatccagtgtattgtgtttggccctctgcgagtgagtgagaga
cagcacctcaaagacaagttttggaattttattttctacaagttcattttcatttttggt
gtgctgaatgtccagactgtggaagaggtggtcatgtggtgcctgtggtttgctggactt
gtttttctgcatctgatggttcagctctgcaaggaccgatttgaatatctttccttttct
cccactacaccgatgagtagccatgggcgagtcctgtctctgttgattgctatgctgctt
tcctgctgcgggttagcagttgtctgctgtgtcacaggctacacccatggaatgcacacc
ttggctttcatggctgcagagtctcttcttgtgacagtgaggacagcccatgtgatttta
cgatatgtaattcacctctgggacctcaaccatgaagggacctgggaaggcaagggaacc
tacgtctattataccgattttgtcatggagctcactcttctgtccctggacctcatgcac
cacattcacatgttgttatttggcaacatctggttatccatggccagcctggtcatcttt
atgcagctgcgttacctgtttcatgaggtgcagcgtcgaatccgtcggcacaagaactat
ctgcgtgtggtcgggaatatggaagccaggtttgcagttgcaactccagaggaactggct
gtcaacaatgacgactgtgccatctgctgggactccatgcaggctgcaaggaaactgccc
tgcggacatcttttccacaactcctgtcttcgttcctggctagaacaagatacatcctgt
ccaacatgcagaatgtctcttaatattgctgacaataatcgtgccagagaagaccatcaa
ggagagaacttggatgagaatttggttcccgtagcagccactgaaggcagacctcgctta
aaccaacacaatcacttcttccactttgatgggtcccggattgcaagttggctgccaagt
ttttcagtggaagtaatgcacaccaccaacattcttggcattacacaggcgagcaactct
cagctgaatgcaatggctcatcagattcaggagatgttcccccaggttccataccacctg
gtgctgcaggacctgcagctgacgcgctcagtggaaattacaacagacaacatcttagag
ggacggattcaagtaccttttcccacacagcggacagaaggcatcagacctgctttgaac
agtcctatggaaaggcccagcactgaccaggaggagggagaagcttcccctcagactgag
tgtgtgccattggacctcagtcctcgcctggaggagaacttggacttcagtgaagtggat
atggagtccaatgaggtggaagactttgaggcccgggggagccgcttctccaagtctgct
gatgagagacagcgcatgttggtccagcgcaaggacgacctcctgcagcaggctcggaaa
cgattcttgaataaaagttctgaagatgtctcggcctcagagagctttctcccctcagaa
ggcacgtcctctgaccccgtgaccctgcgtcgaaggatgctggccgctgctgccgagcgg
aggcttcagaagcagcagacctcctag

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