Marmota marmota marmota (Alpine marmot): 107144727
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Entry
107144727 CDS
T09644
Name
(RefSeq) endoribonuclease Dicer isoform X2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
107144727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107144727
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107144727
microRNA pathway
RISC loading complex
107144727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DSRM_2
dsrm
Motif
Other DBs
NCBI-GeneID:
107144727
NCBI-ProteinID:
XP_015344035
Ensembl:
ENSMMMG00000001354
UniProt:
A0AAJ7ANG1
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MLADTDKRKSFEEDLKTYKAIEKILRNKCSKSVDTGEADVDPIVDDDDVFPPYVLRPDDG
GPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVG
PPMSCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPG
STKRRQCYPKAIPECLRDSYPKPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRC
FGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLE
KPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFV
FKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLT
NLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIH
PIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWKKS
IDSKSFISISNSSTAENDNYCKHSTIVVPENAAHPGANRTSLENHDQMSVNCRALLSESP
SKLQIEVSTDLTAVNGLSYNKNLANGSYDLANRDFCQGNQLNYYKQEIPVQPTTSYPIQN
LYNYENQPKPSDECTLLSNKYLDGNANKSTSEGNPLMAAMPGTTDTVRALMDRRGAEQSP
SVGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEG
RLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNTDKWEKDE
MTKDCMLANGKLDDDSEEEEEEEEEEEEEEEDLMWRAPKEEAEYEDDFLEYDQEHIKFID
NMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSIPFSSDFEDFDYSSWDAMCYLDP
SKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSC
GERAAQLFLCSLGLKVLPVIKRTAREKGLCPARENFSSQQKNLSGSCAAASPRPSAWRDL
EYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTI
TDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKY
FKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAG
AIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGK
VRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagatacagacaaaagaaaaagttttgaagaagacctgaaaacctacaaagca
attgaaaagattttgagaaacaaatgttccaagtctgttgatactggtgaggctgacgtt
gatcctattgtggatgatgacgacgttttcccaccgtatgtgttgaggcctgatgatggg
ggtccccgggtaacaatcaacacagccattggacacatcaatagatactgtgctagatta
ccaagtgatccgtttactcatctagctcccaaatgtagaacccgagagttgcctgatggt
acattttattcaactctttacctgccaatcaactcacctcttcgagcctccattgttggc
ccaccaatgagctgtgtgcgattggctgaaagagtcgtagctctcatttgctgtgaaaaa
ctgcacaaaattggtgaactggatgaacatttgatgccagttggaaaagaaactgttaaa
tatgaggaagagcttgatttacacgatgaagaagaaaccagtgttccaggaagaccaggt
tccacaaaacgaaggcagtgctacccaaaagcaattccagagtgtttaagggatagttat
cccaaacccgagcagccctgttacctctatgtgataggaatggtcttaactactccgtta
cctgatgaacttaacttcagaaggcggaagctctatccccccgaagacaccacacgatgc
tttgggatactgacagccaaacccatacctcagattccacactttcctgtgtacacacgc
tctggagaggtcaccatatccattgagttgaagaagtctggattcacgttgtctctgcag
atgctcgagttgattacaaggcttcaccagtatatattttcacatattcttcggcttgaa
aaacctgcactagaatttaaacctacagacgctgattcagcatactgtgttctacctctt
aacgttgttaatgactccagcactttggacattgattttaaattcatggaagatattgag
aaatctgaagcgcgcataggcattcccagcacaaagtattcaaaagaaactccctttgtt
tttaaattagaagattatcaagatgcagttatcattccaagataccgcaattttgatcag
cctcatcgattttacgtagctgatgtgtacactgatcttaccccactcagtaaatttcct
tcccctgagtatgaaacttttgcagaatattataaaacgaagtataaccttgacctgacc
aatctcaaccagccactgctggatgtggaccacacatcttccagacttaatcttctgaca
cctcgacatttgaatcagaaggggaaagctcttcctctcagcagtgctgagaagagaaaa
gccaagtgggagagtctgcagaataaacagatactggttccagaactctgtgctatacat
ccaattccagcatcgctgtggagaaaagcagtctgtctccccagtatactttatcgcctt
cactgccttttgactgcagaggagctaagagcccagacagccagtgatgctggcgtggga
gtccgatcacttcctgcggattttagataccctaatttagacttcgggtggaaaaaatct
attgacagcaaatctttcatctcaatttctaactcctctacggctgaaaatgataattac
tgtaagcacagcacaattgtagtccctgaaaatgctgcacatccaggtgctaatagaacc
tccttagaaaaccatgaccaaatgtctgtgaactgtagagcattactcagcgagtcgccg
agtaagcttcagattgaggtttcaacagatctgacagcagttaatggtctttcttacaat
aaaaaccttgccaatggcagttacgacttagctaacagagacttttgccaaggaaatcag
ctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcagaat
ttatacaattatgagaaccagcccaagcccagcgatgaatgtactctactgagtaataaa
taccttgatggaaatgctaacaaatctacctcagaaggaaatcccctgatggccgcgatg
cccggtacgacagacaccgttcgagcgcttatggacaggaggggtgctgagcagagccct
tctgttgggtactcctcgaggactcttggcccaaatcctggactcattcttcaggctcta
actttgtcaaatgccagtgatgggtttaacctggagcggcttgaaatgcttggcgactcc
tttctaaagcacgccatcaccacgtatctgttttgcacttaccctgatgctcacgagggc
cgcctttcgtacatgagaagcaaaaaggtcagcaactgtaatctctatcgccttggcaaa
aagaagggactgcccagccgcatggtggtgtctatatttgatccccctgtgaattggctt
cctcctggttatgtggtaaatcaagacaaaagtaacacagataaatgggaaaaggatgaa
atgacaaaagactgcatgttggctaatggcaaactggacgacgactcagaggaggaggag
gaagaggaggaggaggaggaggaggaggaggaggacctgatgtggagggctccgaaggag
gaagccgagtatgaagacgatttcctggagtatgatcaggagcatatcaagttcatagat
aacatgctgatgggctcaggagcttttgtaaagaagatttctctttctcctttctcaacc
actgattctgcatatgagtggaaaatgcccaaaaagtcctcgttaggtagcataccattt
tcatcagactttgaggactttgactacagctcttgggatgccatgtgctatctggatcct
agcaaagctgttgaggaggatgactttgtggtggggttctggaatccgtcagaagaaaac
tgtggcgtcgacacaggaaagcagtccatttcctacgacctgcacacagagcagtgcatt
gccgacaagagcatagctgactgcgtggaagccctgctgggctgctacctgaccagctgc
ggcgagcgggctgctcagctgttcctctgctcgctcggcctgaaggtgctcccggtgatt
aagaggactgctcgggaaaagggcctgtgccctgcccgggagaatttcagcagccaacaa
aagaacctttcagggagctgcgctgcggccagccctcggccctcggcgtggagggacttg
gagtacggctgtctgaagatccccccaaggtgtatgtttgaccatccagatgcagacaaa
accctgaatcacctgatatcagggttcgaaaattttgagaagaaaatcaactacagattc
aagaataaagcttaccttctgcaggccttcacgcatgcctcctaccactacaacactatc
actgattgttaccagcgcttagaattcctgggagatgcaattttggactacctcataacc
aagcacctttacgaagacccacggcagcactccccaggggtcctgaccgacctgcgctct
gctctggtcaacaacaccatctttgcgtcactggctgtgaagtatgactaccacaagtac
tttaaagctgtttctcccgagctcttccatgtcattgacgactttgtgcagtttcagctt
gagaagaacgagatgcaagggatggactctgagcttaggagatcagaggaggatgaagaa
aaagaggaggatattgaagttccaaaggccatgggggatatttttgagtcacttgctggt
gccatctatatggatagtggaatgtcgctggagatggtgtggcaggtgtactatcctatg
atgcgaccactaatagaaaagttttctgcaaatgtgccccgttcccctgtgcgagaactg
cttgaaatggaaccagaaactgccaaatttagcccggctgagagaacttacgatgggaag
gtcagagtcactgtggaagtagtaggaaaggggaaattcaaaggtgttggccgaagttac
aggattgccaaatctgcagcagcaagaagagccctccgaagcctcaaagcaaatcaacct
caggttcccaacagctga
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